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CWL / Snakemake / Nextflow

14/01/25 Show & Tell presentation on the differences between CWL, Snakemake, and Nextflow.

https://uomresearchit.github.io/CWL-Snakemake-Nextflow

You can play with the examples using the Dockerfile provided in this repository:

docker buildx build -t workflow-comparison ./
docker run -it workflow-comparison

cwltool cwl/process.cwl cwl/inputs.yml
snakemake -c1 -s snakemake/process.smk
nextflow run nextflow/process.nf

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Show & Tell: Workflow Engine Comparison

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