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Imglib roi io support#5

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tomburke-rse wants to merge 26 commits intomasterTrNdy/indago:masterfrom imglib-roi-io_supportTrNdy/indago:imglib-roi-io_supportCopy head branch name to clipboard

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Commits on Dec 18, 2019

• Added implementation for adding segmentation source while fetching segmentation.

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Commits on Dec 25, 2019

• Get method for getting segmentation source from each label of a region

  

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Commits on Jun 24, 2020

• TEMPORARY SNAPSHOT dependency imglib2-roi-0.10.3-SNAPSHOT

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• Replace use of deprecated LabelingMapping.SerialisationAccess

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• TEMPORARY debug output

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• Apparent fix for SCIFIO throwing error messages

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• TEMPORARY debug output

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Commits on Jun 25, 2020

• XmlIoLabelingPlus: write LabelingMapping to separate file in binary format

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• LabelData: Use Trove TIntList for fragmentIndices

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• Remove unnecessary explicit type arguments

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• Add LabelingPlus.pack() method to discard unused intermediate label sets

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• Remove debug output

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Commits on Jun 29, 2020

• Fix LabelingPlus.pack() bug

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• Let LabelingSegment only construct its LabelRegion on demand

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• Let FlatForest.Node return its size

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Commits on Oct 20, 2020

• Add support for BSON file format

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Commits on Oct 21, 2020

• Update tests, usage and dependency

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Commits on Nov 5, 2020

• Merge branch 'TagSegmentWithSource-tobi' into imglib-roi-io_support

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Commits on Jan 20, 2021

• Fit the latest roi-io changes

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Commits on Apr 12, 2021

• New mvn wants https only...

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• more https stuff

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• Update version

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• Merge branch 'imglib-roi-io_support' of https://github.com/TrNdy/indago into imglib-roi-io_support

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• Quickfix tests

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Commits on Apr 21, 2021

• Switch parent-pom to scijava

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• Fix tests

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