tiledbsoma 1.14.1 (#200)

Co-authored-by: John Kerl <[email protected]>
TileDB-Inc · Sep 20, 2024 · a7e0b4c · a7e0b4c
1 parent 183d888
commit a7e0b4c
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Showing 6 changed files with 22 additions and 36 deletions.
diff --git a/.ci_support/linux_64_fmt11spdlog1.14.yaml b/.ci_support/linux_64_fmt11spdlog1.14.yaml
@@ -1,7 +1,7 @@
 c_compiler:
 - gcc
 c_compiler_version:
-- '12'
+- '13'
 c_stdlib:
 - sysroot
 c_stdlib_version:
@@ -15,7 +15,7 @@ channel_targets:
 cxx_compiler:
 - gxx
 cxx_compiler_version:
-- '12'
+- '13'
 docker_image:
 - quay.io/condaforge/linux-anvil-cos7-x86_64
 fmt:
@@ -25,7 +25,6 @@ numpy:
 - '1.23'
 - '1.26'
 - '1.22'
-- '1.22'
 pin_run_as_build:
   python:
     min_pin: x.x
@@ -39,7 +38,6 @@ python:
 - 3.10.* *_cpython
 - 3.11.* *_cpython
 - 3.12.* *_cpython
-- 3.8.* *_cpython
 - 3.9.* *_cpython
 r_base:
 - '4.3'

diff --git a/.ci_support/linux_64_fmt9spdlog1.11.yaml b/.ci_support/linux_64_fmt9spdlog1.11.yaml
@@ -1,7 +1,7 @@
 c_compiler:
 - gcc
 c_compiler_version:
-- '12'
+- '13'
 c_stdlib:
 - sysroot
 c_stdlib_version:
@@ -15,7 +15,7 @@ channel_targets:
 cxx_compiler:
 - gxx
 cxx_compiler_version:
-- '12'
+- '13'
 docker_image:
 - quay.io/condaforge/linux-anvil-cos7-x86_64
 fmt:
@@ -25,7 +25,6 @@ numpy:
 - '1.23'
 - '1.26'
 - '1.22'
-- '1.22'
 pin_run_as_build:
   python:
     min_pin: x.x
@@ -39,7 +38,6 @@ python:
 - 3.10.* *_cpython
 - 3.11.* *_cpython
 - 3.12.* *_cpython
-- 3.8.* *_cpython
 - 3.9.* *_cpython
 r_base:
 - '4.3'

diff --git a/.ci_support/osx_64_.yaml b/.ci_support/osx_64_.yaml
@@ -5,7 +5,7 @@ MACOSX_SDK_VERSION:
 c_compiler:
 - clang
 c_compiler_version:
-- '16'
+- '17'
 c_stdlib:
 - macosx_deployment_target
 c_stdlib_version:
@@ -17,7 +17,7 @@ channel_targets:
 cxx_compiler:
 - clangxx
 cxx_compiler_version:
-- '16'
+- '17'
 fmt:
 - '11'
 macos_machine:
@@ -27,7 +27,6 @@ numpy:
 - '1.23'
 - '1.26'
 - '1.22'
-- '1.22'
 pin_run_as_build:
   python:
     min_pin: x.x
@@ -39,7 +38,6 @@ python:
 - 3.10.* *_cpython
 - 3.11.* *_cpython
 - 3.12.* *_cpython
-- 3.8.* *_cpython
 - 3.9.* *_cpython
 r_base:
 - '4.3'

diff --git a/.ci_support/osx_arm64_.yaml b/.ci_support/osx_arm64_.yaml
@@ -5,7 +5,7 @@ MACOSX_SDK_VERSION:
 c_compiler:
 - clang
 c_compiler_version:
-- '16'
+- '17'
 c_stdlib:
 - macosx_deployment_target
 c_stdlib_version:
@@ -17,7 +17,7 @@ channel_targets:
 cxx_compiler:
 - clangxx
 cxx_compiler_version:
-- '16'
+- '17'
 fmt:
 - '11'
 macos_machine:
@@ -27,7 +27,6 @@ numpy:
 - '1.23'
 - '1.26'
 - '1.22'
-- '1.22'
 pin_run_as_build:
   python:
     min_pin: x.x
@@ -39,7 +38,6 @@ python:
 - 3.10.* *_cpython
 - 3.11.* *_cpython
 - 3.12.* *_cpython
-- 3.8.* *_cpython
 - 3.9.* *_cpython
 r_base:
 - '4.3'

diff --git a/build-locally.py b/build-locally.py
diff --git a/recipe/meta.yaml b/recipe/meta.yaml
@@ -1,6 +1,6 @@
 {% set name = "tiledbsoma" %}
-{% set version = "1.13.1" %}
-{% set sha256 = "1b7c20364c50cdf3b9b4c5c82642ef8941b1a8dcc720d32cc887c70b987d013f" %}
+{% set version = "1.14.1" %}
+{% set sha256 = "fe47017c95a00edafdec77e7cd292c1a63bbc58901160ccd81f56c1f0764a67b" %}
 # This is the SHA256 of
 #   TileDB-SOMA-i.j.k.tar.gz
 # from
@@ -23,9 +23,9 @@ source:
 # Pre-tag canary "will Conda be green if we release":
 #source:
 #  git_url: https://github.com/single-cell-data/TileDB-SOMA.git
-#  git_rev: 05013fb7523efd00570773641d1990a699cd43f2
+#  git_rev: 0efe51af4a57f6244e27d9da6acabf166e1293a2
 #  git_depth: -1
-#  # hoping to be 1.13.1 <-- FILL IN HERE
+#  # hoping to be 1.14.0 <-- FILL IN HERE
 
 build:
   number: 0
@@ -45,7 +45,7 @@ outputs:
         - cmake
         - make  # [not win]
       host:
-        - tiledb >=2.25.0,<2.26
+        - tiledb >=2.26.0,<2.27
         - spdlog
         - fmt
     about:
@@ -75,9 +75,6 @@ outputs:
         - cross-python_{{ target_platform }}     # [build_platform != target_platform]
         - pybind11                               # [build_platform != target_platform]
         - pyarrow                                # [build_platform != target_platform]
-        # Needed until https://github.com/single-cell-data/TileDB-SOMA/issues/1926 is resolved,
-        # when the repo's own setup.py won't depend on pyarrow-hotfix anymore
-        - pyarrow-hotfix                         # [build_platform != target_platform]
         - numpy                                  # [build_platform != target_platform]
       host:
         - python
@@ -92,28 +89,22 @@ outputs:
         - wheel
         - numpy
         - pyarrow
-        # Needed until https://github.com/single-cell-data/TileDB-SOMA/issues/1926 is resolved,
-        # when the repo's own setup.py won't depend on pyarrow-hotfix anymore
-        - pyarrow-hotfix
       run:
         - {{ pin_compatible('numpy', lower_bound='1.16', upper_bound='1.27') }}
         - {{ pin_subpackage('libtiledbsoma', exact=True) }}
         - pandas
         - pyarrow
-        # Needed until https://github.com/single-cell-data/TileDB-SOMA/issues/1926 is resolved,
-        # when the repo's own setup.py won't depend on pyarrow-hotfix anymore
-        - pyarrow-hotfix
         - python
         - scipy
         - anndata       # [py>37]
         - anndata <0.9  # [py<=37]
-        - tiledb-py >=0.31.1,<0.32.0
+        - tiledb-py >=0.32.0,<0.33.0
         - typing-extensions >=4.1
         - numba >=0.58.1 # [py>37]
         - numba          # [py<=37]
         - attrs >=22.2
         # Keep this in sync with TileDB-SOMA's somacore version requirement.
-        - somacore ==1.0.13
+        - somacore ==1.0.15
         - scanpy >=1.9.2
     test:
       imports:
@@ -153,7 +144,7 @@ outputs:
         - r-matrix                   # [build_platform != target_platform]
         - r-bit64                    # [build_platform != target_platform]
         - r-rcppint64                # [build_platform != target_platform]
-        - r-tiledb >=0.29.0,<0.30    # [build_platform != target_platform]
+        - r-tiledb >=0.30.0,<0.31    # [build_platform != target_platform]
         - r-arrow                    # [build_platform != target_platform]
         - r-fs                       # [build_platform != target_platform]
         - r-glue                     # [build_platform != target_platform]
@@ -170,7 +161,7 @@ outputs:
         - r-matrix
         - r-bit64
         - r-rcppint64
-        - r-tiledb >=0.29.0,<0.30
+        - r-tiledb >=0.30.0,<0.31
         - r-arrow
         - r-fs
         - r-glue
@@ -187,7 +178,7 @@ outputs:
         - r-r6
         - r-matrix
         - r-bit64
-        - r-tiledb >=0.29.0,<0.30
+        - r-tiledb >=0.30.0,<0.31
         - r-arrow
         - r-fs
         - r-glue