BUGFIX: Pin scipy version + fix Sphinx warning (#13) #157
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| # This workflow will install Python dependencies, run tests and lint with a single version of Python | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: swolfpy | |
| on: | |
| push: | |
| branches-ignore: [] | |
| pull_request: | |
| branches: [ master ] | |
| jobs: | |
| build-linux: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python 3.9 | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.9 | |
| - name: Add conda to system path | |
| run: | | |
| # $CONDA is an environment variable pointing to the root of the miniconda directory | |
| echo $CONDA/bin >> $GITHUB_PATH | |
| - name: Install dependencies | |
| run: | | |
| conda install conda=23.9.0 | |
| conda env update --file environment_dev.yml --name base | |
| - name: Check if feature branch exists in swolfpy-inputdata | |
| run: | | |
| echo "-----------------------------------------" | |
| echo "github.head_ref = ${{ github.head_ref }} ---" | |
| echo "github.ref = ${{ github.ref }} ---" | |
| echo "github.ref_name = ${{ github.ref_name }} ---" | |
| echo "------------------------------------------" | |
| if git ls-remote --exit-code --heads https://github.com/SwolfPy-Project/swolfpy-inputdata.git ${{ github.ref_name }}; then | |
| echo "Branch ${{ github.ref_name }} exists." | |
| echo "BRANCH_INPUTDATA=${{ github.ref_name }}" >> $GITHUB_ENV | |
| else | |
| echo "Branch does not exist. Falling back to 'master' branch." | |
| echo "BRANCH_INPUTDATA=master" >> $GITHUB_ENV | |
| fi | |
| - name: Check if feature branch exists in swolfpy-processmodels | |
| run: | | |
| if git ls-remote --exit-code --heads https://github.com/SwolfPy-Project/swolfpy-processmodels.git ${{ github.ref_name }}; then | |
| echo "Branch ${{ github.ref_name }} exists." | |
| echo "BRANCH_PROCESSMODELS=${{ github.ref_name }}" >> $GITHUB_ENV | |
| else | |
| echo "Branch does not exist. Falling back to 'master' branch." | |
| echo "BRANCH_PROCESSMODELS=master" >> $GITHUB_ENV | |
| fi | |
| - name: Install swolfpy-inputdata from branch | |
| run: | | |
| echo "pip install git+https://github.com/SwolfPy-Project/swolfpy-inputdata.git@${{ env.BRANCH_INPUTDATA }}" | |
| pip install git+https://github.com/SwolfPy-Project/swolfpy-inputdata.git@${{ env.BRANCH_INPUTDATA }} | |
| - name: Install swolfpy-processmodels from branch | |
| run: | | |
| echo "pip install git+https://github.com/SwolfPy-Project/swolfpy-processmodels.git@${{ env.BRANCH_PROCESSMODELS }}" | |
| pip install git+https://github.com/SwolfPy-Project/swolfpy-processmodels.git@${{ env.BRANCH_PROCESSMODELS }} | |
| - name: Check channels | |
| run: | | |
| conda config --show channels | |
| - name: Check installed packages | |
| run: | | |
| pip list | |
| - name: Pre-Commit | |
| run: | | |
| git fetch origin master | |
| pre-commit run --from-ref origin/master --to-ref HEAD --show-diff-on-failure |