Add Ensembl 111

SACGF · Jan 16, 2024 · 280a9d6 · 280a9d6
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commit 280a9d6
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diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -2,7 +2,7 @@
 
 ### Added
 
-- New GFFs: RefSeq RS_2023_10, Ensembl VEP110
+- New GFFs: RefSeq RS_2023_10, Ensembl 110, 111
 - #66 - We now store 'Note' field (thanks holtgrewe for suggestion)
 - Added requirements.txt for 'generate_transcript_data' sections
 - client / JSON data schema version compatability check

diff --git a/generate_transcript_data/ensembl_transcripts_grch38.sh b/generate_transcript_data/ensembl_transcripts_grch38.sh
@@ -25,7 +25,7 @@ fi
 
 #81 is first GFF3 for GRCh38
 merge_args=()
-for release in 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110; do
+for release in 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111; do
   # Switched to using GTFs as they contain protein version
   filename=Homo_sapiens.GRCh38.${release}.gff3.gz
   url=ftp://ftp.ensembl.org/pub/release-${release}/gff3/homo_sapiens/${filename}

diff --git a/generate_transcript_data/json_schema_version.py b/generate_transcript_data/json_schema_version.py
@@ -1,3 +1,3 @@
 # After 0.2.22 we split version into separate code (pip) and data schema versions
 # The cdot client will use its own major/minor to determine whether it can read these data files
-JSON_SCHEMA_VERSION = "0.2.22"
+JSON_SCHEMA_VERSION = "0.2.23"