works for both types of dummy files

input/dummy.txt

@@ -1,56 +1,86 @@
-NODEID  dummy
-UBAC2_HUMAN    True
-H37_HUMAN    True
-PHF3_HUMAN    True
-DDX52_HUMAN    True
-HNRPK_HUMAN    True
-Q5T5H1_HUMAN    True
-ZC11A_HUMAN    True
-TCPG_HUMAN    True
-2A5E_HUMAN    True
-CPNE2_HUMAN    True
-HEYL_HUMAN    True
-CAMP1_HUMAN    True
-SVEP1_HUMAN    True
-SPRL1_HUMAN    True
-C9JFD3_HUMAN    True
-THAP5_HUMAN    True
-NCOR1_HUMAN    True
-SKIL_HUMAN    True
-A8YXX4_HUMAN    True
-CO4A2_HUMAN    True
-ZBTB3_HUMAN    True
-MORC4_HUMAN    True
-HIPK3_HUMAN    True
-ZN200_HUMAN    True
-TGFR1_HUMAN    True
-Q2TU89_HUMAN    True
-SUMO2_HUMAN    True
-UBC9_HUMAN    True
-AXIN1_HUMAN    True
-RS27_HUMAN    True
-UBP25_HUMAN    True
-RN111_HUMAN    True
-CBX4_HUMAN    True
-B4E127_HUMAN    True
-G4XH65_HUMAN    True
-CPNE1_HUMAN    True
-HDAC1_HUMAN    True
-RNF4_HUMAN    True
-SETB1_HUMAN    True
-SMAD2_HUMAN    True
-TRI62_HUMAN    True
-FAF1_HUMAN    True
-EF1G_HUMAN    True
-AHNK_HUMAN    True
-LRP1_HUMAN    True
-UIMC1_HUMAN    True
-B3KWV4_HUMAN    True
-CDC27_HUMAN    True
-RB_HUMAN    True
-ZMYM2_HUMAN    True
-WWP1_HUMAN    True
-RU17_HUMAN    True
-HIPK1_HUMAN    True
-ZZEF1_HUMAN    True
-SMAD4_HUMAN    True
+NODEID	prize	sources	dummy	active
+1433Z_HUMAN	1.041379133		True	True
+41_HUMAN	3.389112802		True	True
+4ET_HUMAN	2.569973509		True	True
+A8K1N6_HUMAN	1.948221966		True	True
+A9CQZ4_HUMAN	0.421460919		True	True
+AAGAB_HUMAN	0.906857382		True	True
+ABCF1_HUMAN	1.662535462		True	True
+ABI1_HUMAN	2.262002188		True	True
+ABI2_HUMAN	6.039545959		True	True
+ABLM1_HUMAN	1.851877252		True	True
+ACACA_HUMAN	1.413801552		True	True
+ACAP2_HUMAN	2.26361378		True	True
+ACINU_HUMAN	5.059742801		True	True
+ACK1_HUMAN	4.634804389		True	True
+ACLY_HUMAN	0.924296287		True	True
+ACTB_HUMAN	6.332977709		True	True
+ADAT1_HUMAN	0.15086641		True	True
+ADCY6_HUMAN	0.213467876		True	True
+ADDA_HUMAN	2.023396633		True	True
+ADNP_HUMAN	1.863304115		True	True
+AFAD_HUMAN	5.746711895		True	True
+AFTIN_HUMAN	1.428578311		True	True
+AHNK_HUMAN	1.03846887		True	True
+AKA10_HUMAN	1.256166574		True	True
+AKA11_HUMAN	0.927725859		True	True
+AKA12_HUMAN	0.839912266		True	True
+AKAP1_HUMAN	1.744860335		True	True
+AKAP2_HUMAN	1.596611866		True	True
+AMOT_HUMAN	1.79256998		True	True
+ANS1A_HUMAN	2.76115098		True	True
+ANXA2_HUMAN	1.709856841		True	True
+AP3D1_HUMAN	4.077699923		True	True
+APC1_HUMAN	0.888837295		True	True
+AR6P4_HUMAN	0.701112743		True	True
+AR6P6_HUMAN	2.695059469		True	True
+ARHG5_HUMAN	7.044363255		True	True
+ARHG7_HUMAN	3.809839832		True	True
+ARHGB_HUMAN	2.260010614		True	True
+ARIP4_HUMAN	0.270475986		True	True
+ARMX3_HUMAN	0.11573305		True	True
+ARP8_HUMAN	1.094787599		True	True
+ASPM_HUMAN	0.369667496		True	True
+AT133_HUMAN	1.627668371		True	True
+AT1A1_HUMAN	2.904315518		True	True
+AT2B1_HUMAN	2.165602139		True	True
+ATRX_HUMAN	0.701149125		True	True
+ATX2L_HUMAN	4.425369048		True	True
+AZI1_HUMAN	1.861521522		True	True
+B2L13_HUMAN	1.614443902		True	True
+B4DGC6_HUMAN	0.752406932		True	True
+B4DM10_HUMAN	0.474391755		True	True
+B4DQA8_HUMAN	0.12336285		True	True
+B4DQQ2_HUMAN	0.509838368		True	True
+B4DSL6_HUMAN	1.401622791		True	True
+B4DZC2_HUMAN	0.736249376		True	True
+BACH_HUMAN	0.409715682		True	True
+BACH2_HUMAN	0.942291628		True	True
+BAD_HUMAN	0.390261342		True	True
+BAG6_HUMAN	0.406028443		True	True
+BAP18_HUMAN	2.420530962		True	True
+BARD1_HUMAN	0.113513875		True	True
+BAZ1B_HUMAN	0.714778368		True	True
+BAZ2A_HUMAN	1.358383434		True	True
+BBX_HUMAN	1.196178614		True	True
+BCAR1_HUMAN	5.368797237		True	True
+BCLF1_HUMAN	3.268307286		True	True
+BCS1_HUMAN	1.435079955		True	True
+BIG3_HUMAN	0.978095454		True	True
+BMS1_HUMAN	1.398231144		True	True
+BORG1_HUMAN	0.8309547		True	True
+BORG4_HUMAN	0.908661259		True	True
+BRAP_HUMAN	0.507219767		True	True
+BRD2_HUMAN	1.88956051		True	True
+BRD3_HUMAN	0.351886484		True	True
+BUD13_HUMAN	1.407446196		True	True
+BZW2_HUMAN	0.610443432		True	True
+C170B_HUMAN	0.887656818		True	True
+C2CD5_HUMAN	0.319586924		True	True
+CA052_HUMAN	1.950626165		True	True
+CA172_HUMAN	0.676879108		True	True
+CAAP1_HUMAN	0.46595922		True	True
+CAF1B_HUMAN	0.356408629		True	True
+CALM_HUMAN	0.977490284		True	True
+CALX_HUMAN	1.062601393		True	True
+CAV1_HUMAN	0.258171175		True	True

spras/omicsintegrator1.py

@@ -75,9 +75,11 @@ def generate_inputs(data, filename_map):
         # Omics Integrator already gives warnings for strange prize values, so we won't here
         node_df.to_csv(filename_map['prizes'],sep='\t',index=False,columns=['NODEID','prize'],header=['name','prize'])
 
-        print("DATA: NODE TABLE")    
+        print("DATA: NODE TABLE - true dummy")    
         print(data.node_table[data.node_table['dummy']==True])
+        print("DATA: NODE TABLE")    
         print(data.node_table.head())
+        print(len(data.node_table))
         print("NODE DF")
         print(node_df.head())