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---
layout: post
title: December 2023 Newsletter
editor: Dan Brady
slug: 2023-12-04-newsletter
date: 2023-12-04T00:00:00Z+0100
tags:
category:
link:
description:
type: text
---

## The University of Sheffield Research Software Engineering Community Newsletter December 2023

Welcome to the December 2023 newsletter for the research software community at The University of Sheffield, featuring
news, opportunities, events and training for you.

### News, Web & Blogs

#### News

- [Linux Foundation Announces Intent to Form the High Performance Software Foundation](https://www.linuxfoundation.org/press/linux-foundation-announces-intent-to-form-high-performance-software-foundation-hpsf)

- [British Library hack: Customer data offered for sale on dark web](https://www.bbc.co.uk/news/entertainment-arts-67544504)

- [Announcement for the location and theme of the SSI Collaboration Workshops 2024](https://www.software.ac.uk/news/announcing-theme-and-location-collaborations-workshop-2024) - 30 April to 02 May 2024 at the University of Warwick.
Themes encompass: Environmental Sustainability, AI/ML tools for science, and Citizen science

- [43 UK institutions reforming recruitment and promotion](https://www.ukrn.org/2023/11/20/43-uk-institutions-reforming-recruitment-and-promotion/)

- [NVIDIA Is A New Sponsor Of The Scikit-Learn consortium at the Inria Foundation](https://blog.scikit-learn.org/funding/nvidia-is-a-new-sponsor/)

- PyPi has completed its first security audit, you can read about what was audited, what was found, and how it was remediated in three parts ([Part 1](https://blog.pypi.org/posts/2023-11-14-1-pypi-completes-first-security-audit/), [Part 2](https://blog.pypi.org/posts/2023-11-14-2-security-audit-remediation-warehouse/), [Part 3](https://blog.pypi.org/posts/2023-11-14-3-security-audit-remediation-cabotage/))

- [Research Software Alliance newsletter - November 2023](https://preview.mailerlite.com/c3q9q5c5p3/2354512809695386395/k7l2/)

#### RSE Advocacy

- [US-RSE and the IEEE Computer Society are pleased to announce the publication of "Research Software Engineers: Creating a Career Path—and a Career"](https://zenodo.org/doi/10.5281/zenodo.10073232)

- [Foundational Competencies and Responsibilities of a Research Software Engineer (pre-print)](https://arxiv.org/abs/2311.11457)

#### Open Research

- [UK research needs to open up to keep up](https://www.researchprofessionalnews.com/rr-news-uk-views-of-the-uk-2023-11-uk-research-needs-to-open-up-to-keep-up/)

- [SoFAIR: The Open University to coordinate new international project to facilitate the reproducibility of research studies](https://blog.core.ac.uk/2023/11/07/sofair-the-open-university-to-coordinate-new-international-project-to-facilitate-the-reproducibility-of-research-studies/)

- [CORE - The world's largest collection of Open Access Research papers](https://core.ac.uk/)

- [UKRN Open Research Resources](https://www.ukrn.org/open-research-resources/) - Animations, Primers, Videos and Training Materials to Support Open Research

- [Ouvrir la science](https://www.ouvrirlascience.fr/software-and-source-codes-college/) - Useful resources from French government funded open science initiative

- From Ouvrir la science: [Higher Education and Research Forges in France - Definition, uses, limitations encountered and needs analysis](https://hal-lara.archives-ouvertes.fr/hal-04208924)

#### Web

- [Royal Statistical Society - Best Practices for Data Visualisation: Insights, advice, and examples (with code) to make data outputs more readable, accessible, and impactful](https://royal-statistical-society.github.io/datavisguide/)

- [Research Dream Team Toolkit](https://research-dream-team-toolkit.readthedocs.io/en/latest/index.html) - A resource intended to make it as easy as possible to organise a workshop aimed at raising awareness of and facilitating discussion around the diversity of roles that contribute to research.

- [Presentation and linked notes from a recent workshop by CiteSoftware group.](https://zenodo.org/records/8356278) Their aim is to drive the adoption of a common research software preservation and citation guidance website for the research community

#### Blogs

- [Navigating research software policies: Insights from the Dutch research community](https://blog.esciencecenter.nl/navigating-research-software-policies-insights-from-the-dutch-research-community-1157b05d22bd)

- Interesting piece on code complexity and software sustainability: [The sustainability doughnut of scientific software](https://science-in-the-digital-era.khinsen.net/#The%20sustainability%20doughnut%20of%20scientific%20software)

- [The low-hanging fruit in computational reproducibility](http://blog.khinsen.net/posts/2023/11/30/The-low-hanging-fruit-in-computational-reproducibility.html)

#### Publications

- [Retracted articles use less free and open-source software and cite it worse](https://direct.mit.edu/qss/article/doi/10.1162/qss_a_00275/118074/Retracted-articles-use-less-free-and-open-source)

- [A Comparative Study of Code Generation using ChatGPT 3.5 across 10 Programming Languages (pre-print)](https://arxiv.org/abs/2308.04477)

- [The Luck of the Draw: Wellcome's Institutional Fund for Research Culture](https://wellcomeopenresearch.org/articles/8-525/v1)

### Events

- [Digital Research Academy Train-the-Trainer program #3](https://events.digital-research.academy/event/32/) - Starting in January 2024, Applications are open until December 15th 2023.

- [4th conference for Research Software Engineering in Germany](https://events.hifis.net/event/994/) - 05-07 March 2024

- [International Research Software Engineering Research (IRSER) Community Meetup](https://www.software.ac.uk/news/international-research-software-engineering-research-irser-community-meetup) - Online (UK time), 16-17 January 2024

### Training

#### External Training

- [Genomics: Learn data management and analytical skills for genomics research - 15-24 January 2024 (online, UK time)](https://cloud-span.york.ac.uk/upcoming/Genomics/)
<!--#### Research IT Training-->

<!--Research IT courses have adopted a hybrid approach. The team will be providing their courses both online and in -->
<!--person for the first time since March 2020. The team provides a place for beginners or advanced users to expand -->
<!--their knowledge of HPC and different programming languages. The courses are part of the Doctoral Development -->
<!--Programme. For more information please visit our training registration web page (via VPN): -->
<!--[crs.shef.ac.uk](https://crs.shef.ac.uk).-->

<!--If a course is "sold out" please join the wait list by signing up - we regularly email people to encourage those -->
<!--that can no longer attend to cancel. Those on the wait list get early notification when the courses are run -->
<!--again.-->

### Opportunities

#### Jobs

- [Senior Research Software Engineer (Research Objects/FAIR Digital Objects) - Closes 8th Dec](https://society-rse.org/job/the-university-of-manchester-escience-laboratory-senior-research-software-engineer-research-objects-fair-digital-objects-sae-023829/)

- [Senior Research Software Engineer (Trusted Research Environments) - Closes 14th Dec](https://society-rse.org/job/the-university-of-manchester-escience-laboratory-senior-research-software-engineer-trusted-research-environments-sae-023829/)

You can always check for advertised RSE and RSE-adjacent roles over at the [RSE society's vacancies
board](https://society-rse.org/careers/vacancies/).

### Digital Research Practice Support Community

The DRPS community is a group for people that support researchers in carrying out research in the digital age. Meetings
are held monthly, with discussions around events, training and opportunities related to the field.

You can join the google group
[here](https://groups.google.com/u/1/a/sheffield.ac.uk/g/digital-research-practice-support-community-group/about) to
stay informed.

The next meeting is scheduled for 2pm on Wednesday 6th December.

### LunchBytes

[LunchBytes](https://rse.shef.ac.uk/community/lunch-bytes/) are short talks from the research community on research
software, data, and infrastructure.

- [Making research software more visible and reusable: Open Source Software and
FAIR4RS](https://bit.ly/open-research-conversation-lunchbytes-fair4rs) (6th December 12:00 - 13:00) in conjunction with Open Research Conversations
we look at the FAIR principles and how they apply to research software under the [FAIR for Research Software (FAIR4RS)
principles](https://zenodo.org/record/6623556#.YqCJTJNBwlw).

#### LunchBytes needs YOU

LunchBytes are organised by and for the research software community at The University of Sheffield. If you'd like to
curate a session on a topic or present something, get in touch by emailing
[[email protected]](mailto:[email protected]) - Or suggest topics
[on the jamboard](https://jamboard.google.com/d/1-51cRf0pwZl8O10CnLeJGAqKcnbww-QGaYjszFK-H38/).

## Support

### Code Clinics

Why not come to a [Code
Clinic](https://docs.google.com/forms/d/e/1FAIpQLScGXS55qjU0D0Zcz-KHOVcNTahcr3YC3H0OpoKBo3lWXWED5A/viewform)? We're keen
to help you.

Code Clinics are fortnightly supported sessions run by the RSE team and IT Services’ [Research
IT](https://www.sheffield.ac.uk/it-services/research) team. They are open to anyone at TUoS writing code for research to
get help with programming problems and general advice on best practices.

At each session, members of the RSE and/or Research IT teams will be available to review code, advise, troubleshoot, and
suggest ways to improve your computational workflows.

### Research IT HPC Drop In

HPC Drop-In sessions are providing assistance with HPC related user issues such as challenges in scaling an application
from desktop to supercomputer. We are considering extending the number of our sessions to two or three weekly. These
interactive sessions could provide a better interface with our users than our non-interactive ticketing system. These
sessions are advertised on the [HPC mailing list](https://groups.google.com/u/1/a/sheffield.ac.uk/g/hpc).

### Research IT Consultations

Alongside the HPC Drop-In sessions, Research IT are also running one to one consultations to solve in depth user
specific problems. These consultations can be booked via our webpage. If you are interested please visit the following
link: <https://students.sheffield.ac.uk/it-services/research>.

## Sheffield RSE Team

The Sheffield RSE Team aims to [collaborate](https://rse.shef.ac.uk/collaboration/guide/) with you to help improve your
research software.

They can provide dedicated staff to ensure that you can deliver excellent research software engineering on your research
projects.

The Sheffield RSE Team provides free [Code Clinics][CCs] (in collaboration with [IT Services][its-res-it]), plus [paid
services][rse-service] that allow us to collaborate longer term.

## Research IT

[Research IT](https://students.sheffield.ac.uk/it-services/research) directly supports research, both academic and commercial.
We provide large scale HPC systems, advice on everything from statistics to ML to data pipelines and training for both
students and staff.

Working with academics, our staff are embedded within research groups on both long and short term engagements.

[CCs]: https://rse.shef.ac.uk/support/code-clinic/
[its-res-it]: https://www.sheffield.ac.uk/it-services/research/
[rse-service]: https://rse.shef.ac.uk/collaboration/

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