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16 Open 179 Closed
16 Open 179 Closed
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Issues list

TRE Documentation: All Of Us Researcher Workbench, UK Biobank Research Analysis Platform documentation Improvements or additions to documentation enhancement New feature or request
#391 opened Nov 1, 2024 by smlmbrt
2 tasks
@smlmbrt @nebfield @joeltg10
The error of MATCH_VARIANTS in profile test user-query User queries & requests
#383 opened Oct 14, 2024 by yambirj
3
Better matching of INDEL variants enhancement New feature or request
#377 opened Sep 30, 2024 by smlmbrt
Nextflow pipeline fails due to missing .pgen file, despite file being present. bug Something isn't working
#373 opened Sep 12, 2024 by Fiwx
1
Update ancestry doc page documentation Improvements or additions to documentation
#371 opened Sep 11, 2024 by smlmbrt
v2.0.0-beta.3 run: failed to find loop device, then --resume results in Failed to invoke observer completion handler (NullPointerException in BcoRenderer) bug Something isn't working user-query User queries & requests
#362 opened Aug 23, 2024 by Fiwx
@nebfield
9
matched_variants.txt.gz empty when pgsc_calc is ran with many scores, resulting in KeyError: 'CHR:POS:A0:A1' and pgscatalog-intersect failure. bug Something isn't working user-query User queries & requests
#361 opened Aug 13, 2024 by Fiwx
@nebfield
9
Improving information about PGS Catalog scoring file versions enhancement New feature or request user-query User queries & requests
#348 opened Jul 31, 2024 by mglev1n
1
Scoring for non-additive models that aren't dominant/recessive bug Something isn't working enhancement New feature or request
#314 opened Jun 14, 2024 by smlmbrt
1
ToDo: test case with single sample enhancement New feature or request
#287 opened Apr 25, 2024 by smlmbrt
Improve gnomAD reference panel (HGDP+1kG) documentation Improvements or additions to documentation enhancement New feature or request
#183 opened Sep 28, 2023 by smlmbrt
2 of 4 tasks
@smlmbrt
Reference creation: current docs/code doesn't support other data bug Something isn't working documentation Improvements or additions to documentation
#164 opened Sep 7, 2023 by smlmbrt
1
Improvements to PCA steps & default reference panel enhancement New feature or request
#133 opened Jul 31, 2023 by smlmbrt
1 of 3 tasks
@smlmbrt @joeltg10
1
Integrate OmicsPred enhancement New feature or request
#99 opened Mar 30, 2023 by smlmbrt
1
Allow combined scorefiles as input documentation Improvements or additions to documentation enhancement New feature or request
#64 opened Nov 15, 2022 by smlmbrt
1
Enhance Sample and Variant-level QC enhancement New feature or request
#21 opened Mar 21, 2022 by smlmbrt
1 task done
3
ProTip! Exclude everything labeled bug with -label:bug.