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We forgot to update the version string when we published the most recent patch 😬 Sorry! To guarantee you're running
The output should match:
You can double check our release page and compare the hash (The terminal output will still say the incorrect version until we fix it in a future release) |
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I don't know how to update to v2.0.0-alpha3
Tried with
nextflow run pgscatalog/pgsc_calc -latest
which results in this messageDeleted the pgscatalog folder within .nextflow and ran a test but it looks like it downloads alpha 2.
Deleted the pgscatalog folder again and downloaded the Source code (zip) file located here:
https://github.com/PGScatalog/pgsc_calc/releases/tag/v2.0.0-alpha.3
Placed the contents in a new .nextflow/assets/pgscataloc/pgsc_calc folder and running:
nextflow run pgscatalog/pgsc_calc -profile docker,test
results in:
Can't find git repository config file -- Repository may be corrupted: /.nextflow/assets/pgscatalog/pgsc_calc
Deleted the pgscatalog folder, ran the test again to download the alpha2 version, replaced the files in the folder with the files included in the Source code (zip) file for alpha3, but running the test command indicates:
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