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Asymmetric Causal Shapley values #395

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Closed

Asymmetric Causal Shapley values #395

wants to merge 62 commits into from

Commits on May 23, 2024

  1. File with causal Shapley value functions

    @LHBO
    LHBO committed May 23, 2024
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  2. Added new function and splitting how the MC samples are made

    @LHBO
    LHBO committed May 23, 2024
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  3. Added causal_ordering and causal_confounding as parameters to explain

    @LHBO
    LHBO committed May 23, 2024
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  4. Updated the setup files

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    LHBO committed May 23, 2024
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  5. Fixed the setup_computations file

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    LHBO committed May 23, 2024
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  6. File for me to explore and test causal Shapley

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    LHBO committed May 23, 2024
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Commits on May 25, 2024

  1. Updated Gaussian approach

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    LHBO committed May 25, 2024
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Commits on May 27, 2024

  1. Updated copula to support causal setup

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    LHBO committed May 27, 2024
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  2. Added asymmetric flag, changed name from causal_confounding to `c… 

    …onfounding`.
    @LHBO
    LHBO committed May 27, 2024
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Commits on May 29, 2024

  1. Commented that some lines can be deleted in categorical

    @LHBO
    LHBO committed May 29, 2024
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  2. Fixed logical error in copula for the causal setup

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    LHBO committed May 29, 2024
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  3. Added function for creating marginal gaussian data

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    LHBO committed May 29, 2024
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  4. Updated causal Shapley to support sampling, i.e., n_combinations.

    @LHBO
    LHBO committed May 29, 2024
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  5. Include asymmetric flag in explain

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    LHBO committed May 29, 2024
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  6. Added extra objects related to causal Shapley. Maybe not needed after… 

    … all, but they show which feature combinations that are actually used in the iterative sampling steps in the causal setup.
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  7. Bike rental example

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    LHBO committed May 29, 2024
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  8. Updated the inst/script

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    LHBO committed May 29, 2024
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  9. Added default values in setup. Needed for explain.forecast

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    LHBO committed May 29, 2024
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  10. Updated such that setup runs for explain forecast

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    LHBO committed May 29, 2024
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Commits on May 31, 2024

  1. Started on the vignette

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    LHBO committed May 31, 2024
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  2. Note to myself

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    LHBO committed May 31, 2024
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  3. Updated the default values for causal_odering and confounding

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    LHBO committed May 31, 2024
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  4. Fixed plot_several_SV so that it works with groups.

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    LHBO committed May 31, 2024
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Commits on Jun 3, 2024

  1. Forgot to update copula and gaussian from causal to causal_sampling.

    @LHBO
    LHBO committed Jun 3, 2024
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  2. Worked more on the vignette

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    LHBO committed Jun 3, 2024
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Commits on Jun 4, 2024

  1. Fixed plot_SV_several_approaches such that it keeps the order of the … 

    …index_explixcands.
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  2. Fixed S_causal_steps_unique that broke for marginal. Now we also remo… 

    …ve NULLs and duplicate of integer(0).
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    LHBO committed Jun 4, 2024
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  3. Updated prepare_data_causal

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    LHBO committed Jun 4, 2024
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  4. More updates to the vignette

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    LHBO committed Jun 4, 2024
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  5. Update gitignore

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    LHBO committed Jun 4, 2024
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  6. Updated vaeac such that it trains on the relevant combinations for … 

    …causal Shapley values
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    LHBO committed Jun 4, 2024
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  7. Changed default value for index_explicands_sort

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    LHBO committed Jun 4, 2024
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  8. Fixed such that used_n_combinations is correct for causal Shapley values

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    LHBO committed Jun 4, 2024
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  9. More updates to the vignette

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    LHBO committed Jun 4, 2024
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Commits on Jun 5, 2024

  1. Typo

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    LHBO committed Jun 5, 2024
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  2. Produce better error message in plot.shapr, and allow for taking the … 

    …mean of grouped features. Otherwise, we cannot make a beeswarm plot for grouped Shapley values
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    LHBO committed Jun 5, 2024
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  3. Typo

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    LHBO committed Jun 5, 2024
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Commits on Jun 6, 2024

  1. Added two new sections

    @LHBO
    LHBO committed Jun 6, 2024
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  2. Update vignette and add figures

    @LHBO
    LHBO committed Jun 6, 2024
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  3. Added test file for setup of asymmetric causal Shapley values

    @LHBO
    LHBO committed Jun 6, 2024
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Commits on Jun 7, 2024

  1. Updated vignette

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    LHBO committed Jun 7, 2024
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  2. Updated heskes files

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    LHBO committed Jun 7, 2024
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  3. Added such that we convert from group to feature level

    @LHBO
    LHBO committed Jun 7, 2024
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  4. Testing out the make categoircal work (not yet)

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    LHBO committed Jun 7, 2024
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  5. Test output

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  6. Typo

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    LHBO committed Jun 7, 2024
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  7. Adde the test results

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Commits on Jun 11, 2024

  1. Added the new categorical version

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    LHBO committed Jun 11, 2024
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  2. Updated the categorical approach

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    LHBO committed Jun 11, 2024
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  3. Added file where we compare the categorical sampling approaches

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    LHBO committed Jun 11, 2024
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  4. Removed that Causal does not support categorical

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    LHBO committed Jun 11, 2024
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  5. Work in progress adding the marginal sampling approach for categorical.

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    LHBO committed Jun 11, 2024
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Commits on Jun 14, 2024

  1. Fixed logical error in vaeac approach

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    LHBO committed Jun 14, 2024
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  2. Updated categorical with copies so we do not update x_explain based o… 

    …n reference
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    LHBO committed Jun 14, 2024
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  3. Changes name from Sbar_now to Sbar_features for consistency across me… 

    …thods
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    LHBO committed Jun 14, 2024
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  4. Updates to the vignette

    @LHBO
    LHBO committed Jun 14, 2024
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  5. Updated the tests

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    LHBO committed Jun 14, 2024
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  6. File to demonstratet the categorical gives a bit different Shapley va… 

    …lues both in the conditional and in the causal framework
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    LHBO committed Jun 14, 2024
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  7. Update the causal prepare data function to also support cateorical

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    LHBO committed Jun 14, 2024
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  8. Added the draw.io figures of the causal orderings

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    LHBO committed Jun 14, 2024
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  9. Added the vignette to rebuild_long_running_vignette

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    LHBO committed Jun 14, 2024
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Commits on Jun 19, 2024

  1. vignette fiks

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    LHBO committed Jun 19, 2024
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