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Fixed typo
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royfrancis committed Nov 29, 2024
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Expand Up @@ -700,7 +700,7 @@ drwxrwsr-x 2 user gXXXXXXX 4.0K Jan 22 22:53 raw_data_qualimapReport
{{< fa exclamation-circle >}} When downloading the HTML files, note that you MUST also download the dependency files (ie; css folder and images_qualimapReport folder), otherwise the HTML file may not render correctly. Remember to replace **username**.

```sh
scp -r username@{{< meta url_cluster >}}/rnaseq:{{< meta path_workspace >}}/rnaseq/4_qualimap .
scp -r username@{{< meta url_cluster >}}:{{< meta path_workspace >}}/rnaseq/4_qualimap .
```

{{< fa comments >}} Check the QualiMap report for one sample and discuss if the sample is of good quality. You only need to do this for one file now. We will do a comparison with all samples when using the MultiQC tool.
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