Add share to interpro properties find path

NBISweden · Jul 1, 2024 · 1fa4a09 · 1fa4a09
1 parent ab2f579
commit 1fa4a09
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/modules/local/interproscan.nf b/modules/local/interproscan.nf
@@ -30,7 +30,7 @@ process INTERPROSCAN {
     if [ -d 'data' ]; then
         # Find interproscan.properties to link data/ from work directory
         INTERPROSCAN_DIR="\$( dirname "\$( dirname "\$( which interproscan.sh )" )" )"
-        INTERPROSCAN_PROPERTIES="\$( find "\$INTERPROSCAN_DIR" -name "interproscan.properties" )"
+        INTERPROSCAN_PROPERTIES="\$( find "\$INTERPROSCAN_DIR/share" -name "interproscan.properties" )"
         cp "\$INTERPROSCAN_PROPERTIES" .
         sed -i "/^bin\\.directory=/ s|.*|bin.directory=\$INTERPROSCAN_DIR/bin|" interproscan.properties
         export INTERPROSCAN_CONF=interproscan.properties