Skip to content

Releases: HumanCellAtlas/lira

v0.22.1

27 Aug 17:33
bcd52d4
Compare
Choose a tag to compare
  • Fixes to Lira API definition

v0.22.0

27 Aug 16:16
d350d8c
Compare
Choose a tag to compare
  • Add data store notifications to pub/sub queue
  • Update DSS subscription queries to pin to metadata schema versions
  • Use max_cromwell_retries config field to set Cromwell default workflow options
  • Add DSS subscription queries for test data
  • Remove outdated snyk badge
  • Fix linting tests

v0.21.0

08 Jul 17:44
cdb9bc4
Compare
Choose a tag to compare
  • Remove deploy and scripts directory (moved to secondary-analysis-deploy repo)
  • Label every workflow with a hash of its bundle-specific inputs
  • Refactor the directory of subscriptions for better file organization
  • Update Optimus subscription to match human or mouse data
  • Add query for single-end SS2 bundles
  • Subscription query migration from ElasticSearch to JMESPath

v0.20.0

07 May 14:20
15a4960
Compare
Choose a tag to compare
  • Add Snyk integration.
  • Add Black and Flake8 linters.
  • Fix an issue with the error handling logic that breaks the Lira API spec.
  • Improve the Lira documentation.
  • Improve the helper scripts to build and start Lira.
  • Subscription query updates to reflect the metadata changes:
    • process_type -> type
    • dissociation_method -> method

v0.19.0

14 Mar 21:56
6faffed
Compare
Choose a tag to compare
  • Update field name in subscriptions (library_construction_approach -> library_construction_method )
  • Use latest version of cromwell-tools

v0.18.1

27 Feb 03:02
7a342c8
Compare
Choose a tag to compare
  • Fix the bug caused by strict validations against API models, which is introduced in v0.18.0.
  • Add security.txt file which holds security concerns.

v0.18.0

25 Feb 16:27
ede05bf
Compare
Choose a tag to compare
  • Make the subscription query for 10x v2 data more specific.
  • Update the version of Connexion App and standardize the Lira API.
  • Update the Swagger UI of Lira, which is the /ui endpoint of Lira.
  • Update the controllers of Lira to adapt to the new API definitions.
  • Update the Lira readme and add new badges.

v0.17.0

04 Feb 20:01
32c55e6
Compare
Choose a tag to compare

Authenticate Cromwell VMs with the Cromwell-as-a-Service (CaaS) service account by using the "google_compute_service_account" workflow options parameter

v0.16.0

23 Jan 01:54
Compare
Choose a tag to compare
  • Use HTTPS for all of the Ingest API endpoints.

v0.15.0

06 Jan 20:46
9a8cf7d
Compare
Choose a tag to compare
  • Update the pull-request-template.
  • Add project_uuid to the metadata attachment in subscriptions. (Require re-subscribe to Data-Store service to take effect)
  • Add Gitlab deployment support as an alternative deployment choice to Jenkins for Lira.