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[update docs] release 1.16.2
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cmdcolin committed Feb 1, 2019
1 parent 00c4b77 commit 5e930f2
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2 changes: 1 addition & 1 deletion package.json
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{
"name": "@gmod/jbrowse",
"main": "browser/main.js",
"version": "1.16.2-alpha.0",
"version": "1.16.2",
"description": "JBrowse - client-side genome browser",
"repository": "https://github.com/GMOD/jbrowse.git",
"scripts": {
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2 changes: 1 addition & 1 deletion release-notes.md
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{{$NEXT}}
# Release 1.16.2 2019-02-01 03:31:36 UTC

## Minor improvements

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2 changes: 1 addition & 1 deletion src/JBrowse/package.json
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{
"name": "JBrowse",
"version": "1.16.2-alpha.0",
"version": "1.16.2",
"copyright":"© 2007-2017 The Evolutionary Software Foundation",
"main": "main",
"dependencies": {
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45 changes: 45 additions & 0 deletions website/blog/2019-01-31-jbrowse-1-16-2.md
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---
layout: post
title: JBrowse 1.16.2 maintenance release
date: 2019-01-31
tags: ["News","Software releases"]
---

I'm happy to announce the release of 1.16.2, it is a smaller maintenance release. It contains several fixes including for CSI in BAM files,
and several other small fixes. Thanks to everyone for communicating requests and bug reports

* [JBrowse-1.16.2.zip](https://github.com/GMOD/jbrowse/releases/download/1.16.2-release/JBrowse-1.16.2.zip) - minified release
* [JBrowse-1.16.2-dev.zip](https://github.com/GMOD/jbrowse/archive/1.16.2-release.zip) - use this if you modify jbrowse source code or use plugins
* [JBrowse-1.16.2-desktop-win32-x64.zip](https://github.com/GMOD/jbrowse/releases/download/1.16.2-release/JBrowse-1.16.2-desktop-win32-x64.zip)
* [JBrowse-1.16.2-desktop-linux-x64.zip](https://github.com/GMOD/jbrowse/releases/download/1.16.2-release/JBrowse-1.16.2-desktop-linux-x64.zip)
* [JBrowse-1.16.2-desktop-darwin-x64.zip](https://github.com/GMOD/jbrowse/releases/download/1.16.2-release/JBrowse-1.16.2-desktop-darwin-x64.zip)




## Minor improvements

* Allow configuring the cache busting behavior for adding random ?v= value
to config file requests. This can be configured in index.html. Thanks to
user <a href="https://github.com/sandilyaamit">@sandilyaamit</a> for reporting, this is actually important to disable
when using Amazon presigned URLs (<a href="https://github.com/cmdcolin">@cmdcolin</a>)

* Adds `fixBounds` config for XYPlot tracks which can be set to false to
disable the behavior of rounding up or down on the min_score/max_score
variables for the ruler. Thanks to <a href="https://github.com/scottcain">@scottcain</a> for the suggestion
(<a href="https://github.com/gmod/jbrowse/pull/1306">issue #1306</a>, <a href="https://github.com/cmdcolin">@cmdcolin</a>)

## Bug fixes

* Fix ability to use CSI indexes with BAM files since 1.16.0 (<a href="https://github.com/cmdcolin">@cmdcolin</a>)

* Fix ability to read some CRAM files with unmapped mates (<a href="https://github.com/cmdcolin">@cmdcolin</a>)

* Fix issue with the browser loading NaN locations on startup (<a href="https://github.com/cmdcolin">@cmdcolin</a>)

* Add fix for exporting GFF3 for newer browsers that have Array.values()
enabled. Thanks to Scott Cain for reporting (<a href="https://github.com/cmdcolin">@cmdcolin</a>)

* Improve error message when refSeqs=file.fai config fails to load
(<a href="https://github.com/cmdcolin">@cmdcolin</a>)

2 changes: 1 addition & 1 deletion website/siteConfig.js
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};

const v = {
"version": "1.16.1"
"version": "1.16.2"
};
const siteVariables = {
"version": v.version,
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