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@DirkEilander
DirkEilander committed Aug 9, 2023
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110 changes: 55 additions & 55 deletions dev/_examples/build_from_cli.html
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Expand Up @@ -519,54 +519,54 @@ <h2>1. Build your first SFINCS model:<a class="headerlink" href="#1.-Build-your-
</div>
<div class="output_area docutils container">
<div class="highlight"><pre>
2023-08-08 12:43:50,070 - build - log - INFO - HydroMT version: 0.8.1.dev0
2023-08-08 12:43:50,070 - build - main - INFO - Building instance of sfincs model at /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_sfincs_base.
2023-08-08 12:43:50,070 - build - main - INFO - User settings:
2023-08-08 12:43:50,096 - build - model_api - INFO - Initializing sfincs model from hydromt_sfincs (v1.0.2.dev0).
2023-08-08 12:43:50,096 - build - model_api - INFO - setup_grid_from_region.region: {&#39;geom&#39;: &#39;data/region.geojson&#39;}
2023-08-08 12:43:50,096 - build - model_api - INFO - setup_grid_from_region.res: 50
2023-08-08 12:43:50,097 - build - model_api - INFO - setup_grid_from_region.crs: utm
2023-08-08 12:43:50,097 - build - model_api - INFO - setup_grid_from_region.rotated: True
2023-08-08 12:43:50,097 - build - model_api - INFO - setup_grid_from_region.hydrography_fn: None
2023-08-08 12:43:50,097 - build - model_api - INFO - setup_grid_from_region.basin_index_fn: None
2023-08-08 12:43:50,097 - build - model_api - INFO - setup_grid_from_region.dec_origin: 0
2023-08-08 12:43:50,097 - build - model_api - INFO - setup_grid_from_region.dec_rotation: 3
2023-08-08 12:43:50,176 - build - model_api - INFO - setup_dep.datasets_dep: [{&#39;elevtn&#39;: &#39;merit_hydro&#39;, &#39;zmin&#39;: 0.001}, {&#39;elevtn&#39;: &#39;gebco&#39;}]
2023-08-08 12:43:50,176 - build - model_api - INFO - setup_dep.buffer_cells: 0
2023-08-08 12:43:50,176 - build - model_api - INFO - setup_dep.interp_method: linear
2023-08-08 12:43:50,273 - build - data_catalog - INFO - Reading data catalog artifact_data v0.0.8 from archive
2023-08-08 12:43:52,571 - build - data_catalog - INFO - Parsing data catalog from /home/runner/.hydromt_data/artifact_data/v0.0.8/data_catalog.yml
2023-08-08 12:43:52,652 - build - data_catalog - INFO - DataCatalog: Getting merit_hydro RasterDataset raster data from /home/runner/.hydromt_data/artifact_data/v0.0.8/merit_hydro/{variable}.tif
2023-08-08 12:43:52,718 - build - data_catalog - INFO - DataCatalog: Getting gebco RasterDataset raster data from /home/runner/.hydromt_data/artifact_data/v0.0.8/gebco.tif
2023-08-08 12:43:53,110 - build - model_api - INFO - setup_mask_active.mask: /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/data/region.geojson
2023-08-08 12:43:53,110 - build - model_api - INFO - setup_mask_active.include_mask: None
2023-08-08 12:43:53,110 - build - model_api - INFO - setup_mask_active.exclude_mask: None
2023-08-08 12:43:53,110 - build - model_api - INFO - setup_mask_active.mask_buffer: 0
2023-08-08 12:43:53,110 - build - model_api - INFO - setup_mask_active.zmin: -5
2023-08-08 12:43:53,110 - build - model_api - INFO - setup_mask_active.zmax: None
2023-08-08 12:43:53,110 - build - model_api - INFO - setup_mask_active.fill_area: 10.0
2023-08-08 12:43:53,110 - build - model_api - INFO - setup_mask_active.drop_area: 0.0
2023-08-08 12:43:53,110 - build - model_api - INFO - setup_mask_active.connectivity: 8
2023-08-08 12:43:53,110 - build - model_api - INFO - setup_mask_active.all_touched: True
2023-08-08 12:43:53,110 - build - model_api - INFO - setup_mask_active.reset_mask: True
2023-08-08 12:43:53,115 - build - data_catalog - INFO - DataCatalog: Getting region.geojson GeoDataFrame vector data from /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/data/region.geojson
2023-08-08 12:43:53,123 - build - geodataframe - INFO - GeoDataFrame: Read vector data and clip to bbox (epsg:4326) [12.646, 45.490, 12.820, 45.586].
2023-08-08 12:43:53,168 - build - regulargrid - INFO - 4 gaps outside valid elevation range &lt; 10.0 km2.
2023-08-08 12:43:53,171 - build - sfincs - INFO - Derive region geometry based on active cells.
2023-08-08 12:43:53,180 - build - model_api - WARNING - Replacing geom: region
2023-08-08 12:43:53,180 - build - model_api - INFO - setup_mask_bounds.btype: waterlevel
2023-08-08 12:43:53,181 - build - model_api - INFO - setup_mask_bounds.include_mask: None
2023-08-08 12:43:53,181 - build - model_api - INFO - setup_mask_bounds.exclude_mask: None
2023-08-08 12:43:53,181 - build - model_api - INFO - setup_mask_bounds.zmin: None
2023-08-08 12:43:53,181 - build - model_api - INFO - setup_mask_bounds.zmax: -1
2023-08-08 12:43:53,181 - build - model_api - INFO - setup_mask_bounds.connectivity: 8
2023-08-08 12:43:53,181 - build - model_api - INFO - setup_mask_bounds.all_touched: False
2023-08-08 12:43:53,181 - build - model_api - INFO - setup_mask_bounds.reset_bounds: False
2023-08-08 12:43:53,214 - build - sfincs - INFO - Writing model data to /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_sfincs_base
2023-08-08 12:43:53,217 - build - sfincs - INFO - Write raster file(s) for grid to &#39;gis&#39; subfolder
2023-08-08 12:43:53,333 - build - sfincs - INFO - Write geom files
2023-08-08 12:43:53,333 - build - sfincs - INFO - Write vector file(s) for geoms to &#39;gis&#39; subfolder
2023-08-08 12:43:53,344 - build - sfincs - WARNING - zsini not in states, skipping
2023-08-09 11:07:26,945 - build - log - INFO - HydroMT version: 0.8.1.dev0
2023-08-09 11:07:26,945 - build - main - INFO - Building instance of sfincs model at /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_sfincs_base.
2023-08-09 11:07:26,945 - build - main - INFO - User settings:
2023-08-09 11:07:26,975 - build - model_api - INFO - Initializing sfincs model from hydromt_sfincs (v1.0.2.dev0).
2023-08-09 11:07:26,975 - build - model_api - INFO - setup_grid_from_region.region: {&#39;geom&#39;: &#39;data/region.geojson&#39;}
2023-08-09 11:07:26,975 - build - model_api - INFO - setup_grid_from_region.res: 50
2023-08-09 11:07:26,975 - build - model_api - INFO - setup_grid_from_region.crs: utm
2023-08-09 11:07:26,976 - build - model_api - INFO - setup_grid_from_region.rotated: True
2023-08-09 11:07:26,976 - build - model_api - INFO - setup_grid_from_region.hydrography_fn: None
2023-08-09 11:07:26,976 - build - model_api - INFO - setup_grid_from_region.basin_index_fn: None
2023-08-09 11:07:26,976 - build - model_api - INFO - setup_grid_from_region.dec_origin: 0
2023-08-09 11:07:26,976 - build - model_api - INFO - setup_grid_from_region.dec_rotation: 3
2023-08-09 11:07:27,034 - build - model_api - INFO - setup_dep.datasets_dep: [{&#39;elevtn&#39;: &#39;merit_hydro&#39;, &#39;zmin&#39;: 0.001}, {&#39;elevtn&#39;: &#39;gebco&#39;}]
2023-08-09 11:07:27,034 - build - model_api - INFO - setup_dep.buffer_cells: 0
2023-08-09 11:07:27,034 - build - model_api - INFO - setup_dep.interp_method: linear
2023-08-09 11:07:27,240 - build - data_catalog - INFO - Reading data catalog artifact_data v0.0.8 from archive
2023-08-09 11:07:29,746 - build - data_catalog - INFO - Parsing data catalog from /home/runner/.hydromt_data/artifact_data/v0.0.8/data_catalog.yml
2023-08-09 11:07:29,839 - build - data_catalog - INFO - DataCatalog: Getting merit_hydro RasterDataset raster data from /home/runner/.hydromt_data/artifact_data/v0.0.8/merit_hydro/{variable}.tif
2023-08-09 11:07:29,922 - build - data_catalog - INFO - DataCatalog: Getting gebco RasterDataset raster data from /home/runner/.hydromt_data/artifact_data/v0.0.8/gebco.tif
2023-08-09 11:07:30,327 - build - model_api - INFO - setup_mask_active.mask: /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/data/region.geojson
2023-08-09 11:07:30,327 - build - model_api - INFO - setup_mask_active.include_mask: None
2023-08-09 11:07:30,327 - build - model_api - INFO - setup_mask_active.exclude_mask: None
2023-08-09 11:07:30,327 - build - model_api - INFO - setup_mask_active.mask_buffer: 0
2023-08-09 11:07:30,327 - build - model_api - INFO - setup_mask_active.zmin: -5
2023-08-09 11:07:30,327 - build - model_api - INFO - setup_mask_active.zmax: None
2023-08-09 11:07:30,327 - build - model_api - INFO - setup_mask_active.fill_area: 10.0
2023-08-09 11:07:30,328 - build - model_api - INFO - setup_mask_active.drop_area: 0.0
2023-08-09 11:07:30,328 - build - model_api - INFO - setup_mask_active.connectivity: 8
2023-08-09 11:07:30,328 - build - model_api - INFO - setup_mask_active.all_touched: True
2023-08-09 11:07:30,328 - build - model_api - INFO - setup_mask_active.reset_mask: True
2023-08-09 11:07:30,333 - build - data_catalog - INFO - DataCatalog: Getting region.geojson GeoDataFrame vector data from /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/data/region.geojson
2023-08-09 11:07:30,342 - build - geodataframe - INFO - GeoDataFrame: Read vector data and clip to bbox (epsg:4326) [12.646, 45.490, 12.820, 45.586].
2023-08-09 11:07:30,396 - build - regulargrid - INFO - 4 gaps outside valid elevation range &lt; 10.0 km2.
2023-08-09 11:07:30,399 - build - sfincs - INFO - Derive region geometry based on active cells.
2023-08-09 11:07:30,410 - build - model_api - WARNING - Replacing geom: region
2023-08-09 11:07:30,410 - build - model_api - INFO - setup_mask_bounds.btype: waterlevel
2023-08-09 11:07:30,411 - build - model_api - INFO - setup_mask_bounds.include_mask: None
2023-08-09 11:07:30,411 - build - model_api - INFO - setup_mask_bounds.exclude_mask: None
2023-08-09 11:07:30,411 - build - model_api - INFO - setup_mask_bounds.zmin: None
2023-08-09 11:07:30,411 - build - model_api - INFO - setup_mask_bounds.zmax: -1
2023-08-09 11:07:30,411 - build - model_api - INFO - setup_mask_bounds.connectivity: 8
2023-08-09 11:07:30,411 - build - model_api - INFO - setup_mask_bounds.all_touched: False
2023-08-09 11:07:30,411 - build - model_api - INFO - setup_mask_bounds.reset_bounds: False
2023-08-09 11:07:30,452 - build - sfincs - INFO - Writing model data to /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_sfincs_base
2023-08-09 11:07:30,455 - build - sfincs - INFO - Write raster file(s) for grid to &#39;gis&#39; subfolder
2023-08-09 11:07:30,592 - build - sfincs - INFO - Write geom files
2023-08-09 11:07:30,592 - build - sfincs - INFO - Write vector file(s) for geoms to &#39;gis&#39; subfolder
2023-08-09 11:07:30,605 - build - sfincs - WARNING - zsini not in states, skipping

</pre></div></div>
</div>
Expand Down Expand Up @@ -1316,13 +1316,13 @@ <h2>6. Update the model to include forcing:<a class="headerlink" href="#6.-Updat
</div>
<div class="output_area docutils container">
<div class="highlight"><pre>
2023-08-08 12:44:22,449 - update - log - INFO - HydroMT version: 0.8.1.dev0
2023-08-08 12:44:22,449 - update - main - INFO - Updating sfincs model at /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_sfincs_base (r+).
2023-08-08 12:44:22,449 - update - main - INFO - Output dir: /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_sfincs_base
2023-08-08 12:44:22,449 - update - main - INFO - User settings:
2023-08-08 12:44:22,473 - update - model_api - WARNING - Model dir already exists and files might be overwritten: /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_sfincs_base/gis.
2023-08-08 12:44:22,473 - update - model_api - INFO - Initializing sfincs model from hydromt_sfincs (v1.0.2.dev0).
2023-08-08 12:44:29,429 - update - main - ERROR - maximum recursion depth exceeded while calling a Python object
2023-08-09 11:08:02,676 - update - log - INFO - HydroMT version: 0.8.1.dev0
2023-08-09 11:08:02,676 - update - main - INFO - Updating sfincs model at /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_sfincs_base (r+).
2023-08-09 11:08:02,676 - update - main - INFO - Output dir: /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_sfincs_base
2023-08-09 11:08:02,676 - update - main - INFO - User settings:
2023-08-09 11:08:02,704 - update - model_api - WARNING - Model dir already exists and files might be overwritten: /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_sfincs_base/gis.
2023-08-09 11:08:02,704 - update - model_api - INFO - Initializing sfincs model from hydromt_sfincs (v1.0.2.dev0).
2023-08-09 11:08:10,620 - update - main - ERROR - maximum recursion depth exceeded while calling a Python object
Traceback (most recent call last):
File &#34;/usr/share/miniconda/envs/hydromt-sfincs-dev/lib/python3.10/site-packages/hydromt/cli/main.py&#34;, line 311, in update
mod.update(model_out=model_out, opt=opt, forceful_overwrite=fo)
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