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@DirkEilander
DirkEilander committed Dec 21, 2023
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172 changes: 86 additions & 86 deletions dev/_examples/build_from_cli.html
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2 changes: 1 addition & 1 deletion dev/_examples/build_from_script.html
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Expand Up @@ -1296,7 +1296,7 @@ <h2>16. Save all files<a class="headerlink" href="#16.-Save-all-files" title="Li
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[&#39;sfincs.obs&#39;, &#39;sfincs.sbg&#39;, &#39;sfincs.bzs&#39;, &#39;sfincs.src&#39;, &#39;subgrid&#39;, &#39;sfincs.crs&#39;, &#39;sfincs.inp&#39;, &#39;sfincs.msk&#39;, &#39;sfincs.weir&#39;, &#39;sfincs.dis&#39;, &#39;sfincs.ind&#39;, &#39;hydromt_data.yml&#39;, &#39;gis&#39;, &#39;sfincs.scs&#39;, &#39;hydromt.log&#39;, &#39;sfincs.bnd&#39;, &#39;figs&#39;, &#39;precip_2d.nc&#39;]
[&#39;sfincs.obs&#39;, &#39;sfincs.weir&#39;, &#39;figs&#39;, &#39;precip_2d.nc&#39;, &#39;sfincs.sbg&#39;, &#39;sfincs.scs&#39;, &#39;hydromt_data.yml&#39;, &#39;sfincs.bnd&#39;, &#39;sfincs.src&#39;, &#39;gis&#39;, &#39;hydromt.log&#39;, &#39;sfincs.bzs&#39;, &#39;sfincs.crs&#39;, &#39;sfincs.msk&#39;, &#39;subgrid&#39;, &#39;sfincs.ind&#39;, &#39;sfincs.inp&#39;, &#39;sfincs.dis&#39;]
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<p>Your basemap and forcing figures are saved in the folder ‘figs’, GIS files (tiff &amp; geojson) of your model setup in ‘gis’ and merged elevation and manning roughness on subgrid resolution in ‘subgrid’.</p>
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50 changes: 25 additions & 25 deletions dev/_examples/example_forcing.html
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Expand Up @@ -463,10 +463,10 @@ <h1>Working with forcing conditions<a class="headerlink" href="#Working-with-for
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2023-12-11 08:44:59,513 - root - log - INFO - HydroMT version: 0.9.1
2023-12-11 08:44:59,551 - root - data_catalog - INFO - Reading data catalog archive artifact_data v0.0.8
2023-12-11 08:44:59,551 - root - data_catalog - INFO - Parsing data catalog from /home/runner/.hydromt_data/artifact_data/v0.0.8/data_catalog.yml
2023-12-11 08:44:59,691 - root - model_api - INFO - Initializing sfincs model from hydromt_sfincs (v1.0.3.dev0).
2023-12-21 10:52:57,153 - root - log - INFO - HydroMT version: 0.9.1
2023-12-21 10:52:57,190 - root - data_catalog - INFO - Reading data catalog archive artifact_data v0.0.8
2023-12-21 10:52:57,191 - root - data_catalog - INFO - Parsing data catalog from /home/runner/.hydromt_data/artifact_data/v0.0.8/data_catalog.yml
2023-12-21 10:52:57,323 - root - model_api - INFO - Initializing sfincs model from hydromt_sfincs (v1.0.3.dev0).
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2023-12-11 08:44:59,721 - root - rasterdataset - INFO - Reading era5_hourly netcdf data from /home/runner/.hydromt_data/artifact_data/v0.0.8/era5_hourly.nc
2023-12-11 08:44:59,909 - root - sfincs - INFO - Write forcing files
2023-12-21 10:52:57,354 - root - rasterdataset - INFO - Reading era5_hourly netcdf data from /home/runner/.hydromt_data/artifact_data/v0.0.8/era5_hourly.nc
2023-12-21 10:52:57,541 - root - sfincs - INFO - Write forcing files
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2023-12-11 08:44:59,920 - root - rasterdataset - INFO - Reading era5_hourly netcdf data from /home/runner/.hydromt_data/artifact_data/v0.0.8/era5_hourly.nc
2023-12-11 08:44:59,970 - root - model_api - WARNING - Replacing forcing: precip
2023-12-21 10:52:57,552 - root - rasterdataset - INFO - Reading era5_hourly netcdf data from /home/runner/.hydromt_data/artifact_data/v0.0.8/era5_hourly.nc
2023-12-21 10:52:57,602 - root - model_api - WARNING - Replacing forcing: precip
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2023-12-11 08:44:59,978 - root - dataframe - INFO - Reading csv data from precip.csv
2023-12-21 10:52:57,609 - root - dataframe - INFO - Reading csv data from precip.csv
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2023-12-11 08:45:00,411 - root - rasterdataset - INFO - Reading dtu10mdt raster data from /home/runner/.hydromt_data/artifact_data/v0.0.8/dtu10mdt.tif
2023-12-11 08:45:00,453 - root - model_api - WARNING - Replacing forcing: bzs
2023-12-21 10:52:58,040 - root - rasterdataset - INFO - Reading dtu10mdt raster data from /home/runner/.hydromt_data/artifact_data/v0.0.8/dtu10mdt.tif
2023-12-21 10:52:58,082 - root - model_api - WARNING - Replacing forcing: bzs
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2023-12-11 08:45:00,642 - root - dataframe - INFO - Reading csv data from waterlevel.csv
2023-12-11 08:45:00,665 - root - model_api - WARNING - Replacing forcing: bzs
2023-12-21 10:52:58,273 - root - dataframe - INFO - Reading csv data from waterlevel.csv
2023-12-21 10:52:58,296 - root - model_api - WARNING - Replacing forcing: bzs
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2023-12-11 08:45:00,852 - hydromt.data_adapter.geodataset - geodataset - INFO - Reading gtsmv3_eu_era5 netcdf data from /home/runner/.hydromt_data/artifact_data/v0.0.8/gtsmv3_eu_era5.nc
2023-12-11 08:45:00,958 - root - rasterdataset - INFO - Reading dtu10mdt raster data from /home/runner/.hydromt_data/artifact_data/v0.0.8/dtu10mdt.tif
2023-12-11 08:45:00,988 - root - model_api - WARNING - Replacing forcing: bzs
2023-12-21 10:52:58,483 - hydromt.data_adapter.geodataset - geodataset - INFO - Reading gtsmv3_eu_era5 netcdf data from /home/runner/.hydromt_data/artifact_data/v0.0.8/gtsmv3_eu_era5.nc
2023-12-21 10:52:58,587 - root - rasterdataset - INFO - Reading dtu10mdt raster data from /home/runner/.hydromt_data/artifact_data/v0.0.8/dtu10mdt.tif
2023-12-21 10:52:58,617 - root - model_api - WARNING - Replacing forcing: bzs
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2023-12-11 08:45:01,286 - root - sfincs - INFO - Write forcing files
2023-12-11 08:45:01,304 - root - sfincs - INFO - Write vector file(s) for forcing.bzs to &#39;gis&#39; subfolder
2023-12-21 10:52:58,916 - root - sfincs - INFO - Write forcing files
2023-12-21 10:52:58,934 - root - sfincs - INFO - Write vector file(s) for forcing.bzs to &#39;gis&#39; subfolder
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2023-12-11 08:45:01,349 - hydromt_sfincs.sfincs - model_api - INFO - Initializing sfincs model from hydromt_sfincs (v1.0.3.dev0).
2023-12-11 08:45:01,365 - hydromt_sfincs.sfincs - sfincs - WARNING - Index in bndfile does not match /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_example/gis/bnd.geojson
2023-12-11 08:45:01,382 - hydromt_sfincs.sfincs - sfincs - WARNING - Index in bndfile does not match /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_example/gis/bnd.geojson
2023-12-11 08:45:01,396 - hydromt_sfincs.sfincs - sfincs - WARNING - Index in bndfile does not match /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_example/gis/bnd.geojson
2023-12-11 08:45:01,401 - hydromt_sfincs.sfincs - model_api - WARNING - Replacing forcing: bzs
2023-12-11 08:45:01,411 - hydromt_sfincs.sfincs - sfincs - WARNING - Index in bndfile does not match /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_example/gis/bnd.geojson
2023-12-11 08:45:01,416 - hydromt_sfincs.sfincs - model_api - WARNING - Replacing forcing: precip
2023-12-21 10:52:58,977 - hydromt_sfincs.sfincs - model_api - INFO - Initializing sfincs model from hydromt_sfincs (v1.0.3.dev0).
2023-12-21 10:52:58,995 - hydromt_sfincs.sfincs - sfincs - WARNING - Index in bndfile does not match /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_example/gis/bnd.geojson
2023-12-21 10:52:59,014 - hydromt_sfincs.sfincs - sfincs - WARNING - Index in bndfile does not match /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_example/gis/bnd.geojson
2023-12-21 10:52:59,027 - hydromt_sfincs.sfincs - sfincs - WARNING - Index in bndfile does not match /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_example/gis/bnd.geojson
2023-12-21 10:52:59,032 - hydromt_sfincs.sfincs - model_api - WARNING - Replacing forcing: bzs
2023-12-21 10:52:59,042 - hydromt_sfincs.sfincs - sfincs - WARNING - Index in bndfile does not match /home/runner/work/hydromt_sfincs/hydromt_sfincs/docs/_examples/tmp_example/gis/bnd.geojson
2023-12-21 10:52:59,047 - hydromt_sfincs.sfincs - model_api - WARNING - Replacing forcing: precip
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2 changes: 1 addition & 1 deletion dev/_examples/run_sfincs_model.html
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Expand Up @@ -795,7 +795,7 @@ <h2>Created netcdf output files<a class="headerlink" href="#Created-netcdf-outpu
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[&#39;sfincs.obs&#39;, &#39;sfincs.bzs&#39;, &#39;sfincs.src&#39;, &#39;sfincs_map.nc&#39;, &#39;sfincs.inp&#39;, &#39;sfincs.msk&#39;, &#39;sfincs.dis&#39;, &#39;sfincs.ind&#39;, &#39;gis&#39;, &#39;sfincs_log.txt&#39;, &#39;sfincs.bnd&#39;, &#39;figs&#39;, &#39;sfincs.dep&#39;, &#39;run.bat&#39;, &#39;sfincs_his.nc&#39;]
[&#39;run.bat&#39;, &#39;sfincs.obs&#39;, &#39;figs&#39;, &#39;sfincs.bnd&#39;, &#39;sfincs.src&#39;, &#39;gis&#39;, &#39;sfincs_his.nc&#39;, &#39;sfincs.bzs&#39;, &#39;sfincs.dep&#39;, &#39;sfincs.msk&#39;, &#39;sfincs_map.nc&#39;, &#39;sfincs_log.txt&#39;, &#39;sfincs.ind&#39;, &#39;sfincs.inp&#39;, &#39;sfincs.dis&#39;]
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<p>We see here the earlier inspected log-file <em>‘sfincs_log.txt’</em></p>
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2 changes: 1 addition & 1 deletion dev/_examples/sfincs_results_animation.html
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Expand Up @@ -529,7 +529,7 @@ <h2>Plot instantaneous water depths<a class="headerlink" href="#Plot-instantaneo
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&lt;xarray.plot.facetgrid.FacetGrid at 0x7fb935e02f20&gt;
&lt;xarray.plot.facetgrid.FacetGrid at 0x7fa95b85df60&gt;
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4 changes: 2 additions & 2 deletions dev/_modules/hydromt_sfincs/sfincs.html
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Expand Up @@ -4071,7 +4071,7 @@ <h1>Source code for hydromt_sfincs.sfincs</h1><div class="highlight"><pre>
<span class="c1"># read geodataframes describing valid areas</span>
<span class="k">if</span> <span class="s2">&quot;mask&quot;</span> <span class="ow">in</span> <span class="n">dataset</span><span class="p">:</span>
<span class="n">gdf_valid</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">data_catalog</span><span class="o">.</span><span class="n">get_geodataframe</span><span class="p">(</span>
<span class="n">path_or_key</span><span class="o">=</span><span class="n">dataset</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s2">&quot;mask&quot;</span><span class="p">),</span>
<span class="n">dataset</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s2">&quot;mask&quot;</span><span class="p">),</span>
<span class="n">bbox</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">mask</span><span class="o">.</span><span class="n">raster</span><span class="o">.</span><span class="n">transform_bounds</span><span class="p">(</span><span class="mi">4326</span><span class="p">),</span>
<span class="p">)</span>
<span class="n">dd</span><span class="o">.</span><span class="n">update</span><span class="p">({</span><span class="s2">&quot;gdf_valid&quot;</span><span class="p">:</span> <span class="n">gdf_valid</span><span class="p">})</span>
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<span class="c1"># read geodataframes describing valid areas</span>
<span class="k">if</span> <span class="s2">&quot;mask&quot;</span> <span class="ow">in</span> <span class="n">dataset</span><span class="p">:</span>
<span class="n">gdf_valid</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">data_catalog</span><span class="o">.</span><span class="n">get_geodataframe</span><span class="p">(</span>
<span class="n">path_or_key</span><span class="o">=</span><span class="n">dataset</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s2">&quot;mask&quot;</span><span class="p">),</span>
<span class="n">dataset</span><span class="o">.</span><span class="n">get</span><span class="p">(</span><span class="s2">&quot;mask&quot;</span><span class="p">),</span>
<span class="n">bbox</span><span class="o">=</span><span class="bp">self</span><span class="o">.</span><span class="n">mask</span><span class="o">.</span><span class="n">raster</span><span class="o">.</span><span class="n">transform_bounds</span><span class="p">(</span><span class="mi">4326</span><span class="p">),</span>
<span class="p">)</span>
<span class="n">dd</span><span class="o">.</span><span class="n">update</span><span class="p">({</span><span class="s2">&quot;gdf_valid&quot;</span><span class="p">:</span> <span class="n">gdf_valid</span><span class="p">})</span>
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3 changes: 3 additions & 0 deletions dev/changelog.html
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Expand Up @@ -469,6 +469,9 @@ <h2>Changed<a class="headerlink" href="#changed" title="Link to this heading">#<
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<section id="fixed">
<h2>Fixed<a class="headerlink" href="#fixed" title="Link to this heading">#</a></h2>
<ul class="simple">
<li><p>fixed masking of elevation and manning datasets when providing mask attribute</p></li>
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<section id="deprecated">
<h2>Deprecated<a class="headerlink" href="#deprecated" title="Link to this heading">#</a></h2>
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2 changes: 1 addition & 1 deletion dev/searchindex.js
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