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Somatic SV filter update, ClinVar submitter role, IGV and MEI fixes
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@dnil dnil released this 13 Jun 13:22
· 1267 commits to main since this release
v4.69
480f14e
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Learn about vigilant mode.

[4.69]

Added

  • ClinVar submission howto available also on Case page
  • Somatic score and filtering for somatic SV callers, if available
  • Show caller as a tooltip on variantS list

Fixed

  • Crash when attempting to export phenotype from a case that had never had phenotypes
  • Aesthetic fix to Causative and Pinned Variants on Case page
  • Structural inconsistency for ClinVar Blueprint templates
  • Updated igv.js to 2.15.8 to fix track default color bug
  • Fixed release versions for actions.
  • Freeze tornado below 6.3.0 for compatibility with livereload 2.6.3
  • Force update variants count on case re-upload
  • IGV locus search not working - add genome reference id
  • Pin links to MEI variants should end up on MEI not SV variant view
  • Load also matching MEI variants on forced region load
  • Allow excluding MEI from case variant deletion
  • Fixed the name of the assigned user when the internal user ID is different from the user email address
  • Gene variantS should display gene function, region and full hgvs

Changed

  • FontAwesome integrity check fail (updated resource)
  • Removed ClinVar API validation buttons in favour of direct API submission
  • Improved layout of Institute settings page
  • ClinVar API key and allowed submitters are set in the Institute settings page
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