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STRs filtering, cancer QC and coverage report and igv.js browser fixes

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@northwestwitch northwestwitch released this 04 Feb 09:47
393ed98

[4.29]

Added

  • Added a page about migrating potentially breaking changes to the documentation
  • markdown_include in development requirements file
  • STR variants filter
  • Display source, Z-score, inheritance pattern for STR annotations from Stranger (>0.6.1) if available
  • Coverage and quality report to cancer view

Fixed

  • ACMG classification page crashing when trying to visualize a classification that was removed
  • Pretty print HGVS on gene variants (URL-decode VEP)
  • Broken or missing link in the documentation
  • Multiple gene names in ClinVar submission form
  • Inheritance model select field in ClinVar submission
  • IGV.js >2.7.0 has an issue with the gene track zoom levels - temp freeze at 2.7.0
  • Revert CORS-anywhere and introduce a local http proxy for cloud tracks