WIP: Try to get GHA workflow to work #17
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: Python Package using Conda | |
on: [push] | |
jobs: | |
build-linux: | |
runs-on: ubuntu-20.04 | |
strategy: | |
max-parallel: 5 | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python 3.6 | |
uses: actions/setup-python@v3 | |
with: | |
python-version: '3.6.15' | |
- name: Install micromamba | |
run: | | |
bash <(curl -L micro.mamba.pm/install.sh) | |
export MAMBA_EXE='/home/runner/.local/bin/micromamba' | |
export MAMBA_ROOT_PREFIX='/home/runner/micromamba' | |
- name: Install dependencies | |
run: | | |
export LANG=en_US.iso885915 | |
echo $LANG | |
micromamba create --file environment.yml | |
- name: Install microSALT | |
run: | | |
micromamba activate microSALT | |
mkdir ~/.microSALT && cp configExample.json ~/.microSALT/config.json | |
GITHUB_BRANCH=${GITHUB_REF##*/} | |
pip install -r requirements.txt -r requirements-dev.txt | |
pip install -U . | |
#- name: Lint with flake8 | |
# run: | | |
# #micromamba install flake8 | |
# # stop the build if there are Python syntax errors or undefined names | |
# #flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | |
# # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | |
# #flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics | |
- name: Test with pytest | |
run: | | |
pytest --cov=microSALT tests/ | |
- name: Run Coveralls | |
run: | | |
coveralls |