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fix(downsample help cmd) (#3394) (patch)
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Description
closes: #3052
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ChrOertlin authored Jul 4, 2024
1 parent 4e655da commit b6c4cea
Showing 1 changed file with 4 additions and 2 deletions.
6 changes: 4 additions & 2 deletions cg/cli/downsample.py
Original file line number Diff line number Diff line change
Expand Up @@ -24,13 +24,15 @@ def downsample():
"samples",
help="Downsample reads in one or multiple samples in a case. Usage: \n"
"For a single sample: cg downsample samples -c supersonicturtle -cn new_case_name -i ACC1234 0.1\n"
"For multiple samples:cg downsample samples -c supersonicturtle -cn new_case_name -i ACC1234 0.1 -i ACC12324 10",
"For multiple samples:cg downsample samples -c supersonicturtle -cn new_case_name -i ACC1234 0.1 -i ACC12324 10\n"
"If multiple samples are provided possible sample relationships will need to be added using:\n"
"cg add relationship.",
)
@click.option(
"-c",
"--case-id",
required=True,
help="Case identifier used in statusdb, e.g. supersonicturtle. The case information wil be transferred to the downsampled case.",
help="Case identifier used in statusdb, e.g. supersonicturtle.",
)
@click.option(
"-cn",
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