Skip to content

Commit

Permalink
alphabetical order
Browse files Browse the repository at this point in the history
  • Loading branch information
diitaz93 committed Sep 2, 2024
1 parent 050c187 commit adc5c2d
Show file tree
Hide file tree
Showing 2 changed files with 7 additions and 7 deletions.
2 changes: 1 addition & 1 deletion cg/constants/constants.py
Original file line number Diff line number Diff line change
Expand Up @@ -135,14 +135,14 @@ class Workflow(StrEnum):
BALSAMIC_QC: str = "balsamic-qc"
BALSAMIC_UMI: str = "balsamic-umi"
DEMULTIPLEX: str = "demultiplex"
RAW_DATA: str = "raw-data"
FLUFFY: str = "fluffy"
JASEN: str = "jasen"
MICROSALT: str = "microsalt"
MIP_DNA: str = "mip-dna"
MIP_RNA: str = "mip-rna"
MUTANT: str = "mutant"
RAREDISEASE: str = "raredisease"
RAW_DATA: str = "raw-data"
RNAFUSION: str = "rnafusion"
RSYNC: str = "rsync"
SPRING: str = "spring"
Expand Down
12 changes: 6 additions & 6 deletions cg/constants/delivery.py
Original file line number Diff line number Diff line change
Expand Up @@ -4,15 +4,15 @@
from cg.constants.housekeeper_tags import AlignmentFileTag, AnalysisTag, HermesFileTag

ONLY_ONE_CASE_PER_TICKET: list[Workflow] = [
Workflow.RAW_DATA,
Workflow.MICROSALT,
Workflow.MUTANT,
Workflow.RAW_DATA,
]

SKIP_MISSING: list[Workflow] = [
Workflow.RAW_DATA,
Workflow.MICROSALT,
Workflow.MUTANT,
Workflow.RAW_DATA,
]

BALSAMIC_ANALYSIS_CASE_TAGS: list[set[str]] = [
Expand Down Expand Up @@ -172,10 +172,6 @@
"case_tags": MICROSALT_ANALYSIS_CASE_TAGS,
"sample_tags": MICROSALT_ANALYSIS_SAMPLE_TAGS,
},
Workflow.RAW_DATA: {
"case_tags": FASTQ_ANALYSIS_CASE_TAGS,
"sample_tags": FASTQ_ANALYSIS_SAMPLE_TAGS,
},
Workflow.MUTANT: {
"case_tags": MUTANT_ANALYSIS_CASE_TAGS,
"sample_tags": MUTANT_ANALYSIS_SAMPLE_TAGS,
Expand All @@ -184,6 +180,10 @@
"case_tags": CLINICAL_DELIVERY_TAGS,
"sample_tags": CLINICAL_DELIVERY_TAGS,
},
Workflow.RAW_DATA: {
"case_tags": FASTQ_ANALYSIS_CASE_TAGS,
"sample_tags": FASTQ_ANALYSIS_SAMPLE_TAGS,
},
Workflow.RNAFUSION: {
"case_tags": CLINICAL_DELIVERY_TAGS,
"sample_tags": CLINICAL_DELIVERY_TAGS,
Expand Down

0 comments on commit adc5c2d

Please sign in to comment.