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Variable slurm priorities for jobs #130

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talnor opened this issue Feb 7, 2022 · 0 comments
Open

Variable slurm priorities for jobs #130

talnor opened this issue Feb 7, 2022 · 0 comments
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CG Upgrades Effort S Effort small Gain S Gain small
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@talnor
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talnor commented Feb 7, 2022

What needs to be done:
Currently all jobs are submitted to slurm with highest priority, which is not always correct.

Suggestions on how to get it done:
Set the priority for all jobs in a case based on the highest priority sample in that case (this avoids delaying high prio samples due to low prio samples being in the same case). Priorities are available in the case config input for each sample ("priority").

What are the arguments for getting it done:

Task is considered finished when:

  • slurm job priority is set variably as described above.
@talnor talnor added Effort S Effort small Enhancement New feature or request Gain S Gain small CG Upgrades labels Feb 7, 2022
@talnor talnor assigned talnor and unassigned talnor Feb 7, 2022
@talnor talnor removed the Enhancement New feature or request label Feb 22, 2022
@pbiology pbiology added this to the Release 5 milestone Jun 29, 2023
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