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CCPBioSim · Jan 21, 2025 · 98c4d60 · 98c4d60
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commit 98c4d60
Showing 1 changed file with 7 additions and 7 deletions.
diff --git a/paper/paper.md b/paper/paper.md
@@ -63,9 +63,9 @@ The first Unit is dedicated to providing background on protein structure, and ho
 | L1: Introduction to Proteins | [Lecture Slides](https://github.com/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/1_Introduction/Lecture_1_Introduction.pdf) | 
 | L2: Understanding Protein Systems | [Lecture Slides](https://github.com/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/2_Protein_Preparation/Lecture_2_Protein_Prep.pdf)
 | L3: Protein-Ligand Docking                 |  [Lecture Slides](https://github.com/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/3_Docking/Lecture_3_Docking.pdf)| 
-| P: Protein-Ligand Docking                 |  [![Docking](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/3_Docking/3_Docking.ipynb)| 
+| P: Protein-Ligand Docking                 |  [Notebook](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/3_Docking/3_Docking.ipynb)| 
 | L4: Simulation Setup          | [Lecture Slides](https://github.com/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/4_Simulation_Setup/Lecture_4_Simulation_setup.pdf) |
-| P: Simulation Setup          | [![Simulation](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/4_Simulation_Setup/4_Simulation_Setup.ipynb) |
+| P: Simulation Setup          | [Notebook](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/4_Simulation_Setup/4_Simulation_Setup.ipynb) |
 
 ### Unit 2: Simulation Analysis
 
@@ -74,14 +74,14 @@ The second Unit is dedicated to providing the students with means to extract rel
 | Session                                             | Materials |
 |-----------------------------------------------------|-----------|
 | L5: Simulation Basic Analyses             | [Lecture Slides](https://github.com/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/5_Analysis_MDAnalysis/Lecture_5_Analysis_MDAnalysis.pdf)|
-| P: Simulation Basic Analyses             | [![Analysis_0](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/5_Analysis_MDAnalysis/5_Analysis_MDAnalysis.ipynb)|
+| P: Simulation Basic Analyses             | [Notebook](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/5_Analysis_MDAnalysis/5_Analysis_MDAnalysis.ipynb)|
 | L6: Dimensionality Reduction                   | [Lecture Slides](https://github.com/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/6_Analysis_DR/Lecture_6_DR.pdf)  |
-| P: Dimensionality Reduction, part 1           |  [![Analysis_1](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/6_Analysis_DR/6_Analysis_part1.ipynb)|
-| P: Dimensionality Reduction, part 2           | [![Analysis_2](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/6_Analysis_DR/6_Analysis_part2.ipynb)|
+| P: Dimensionality Reduction, part 1           |  [Notebook](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/6_Analysis_DR/6_Analysis_part1.ipynb)|
+| P: Dimensionality Reduction, part 2           | [Notebook](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/6_Analysis_DR/6_Analysis_part2.ipynb)|
 | L7: Clustering   | [Lecture Slides](https://github.com/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/7_Analysis_clustering/Lecture_7_Clustering.pdf)|
-| P: Clustering   | [![Analysis_3](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/7_Analysis_clustering/7_clustering.ipynb) |
+| P: Clustering   | [Notebook](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/7_Analysis_clustering/7_clustering.ipynb) |
 | L8: Data Classification    | [Lecture Slides](https://github.com/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/8_Analysis_classification/Lecture_8_classification.pdf) | 
-| P: Data Classification  | [![Analysis_4](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/8_Analysis_classification/1_classification.ipynb) |
+| P: Data Classification  | [Notebook](https://colab.research.google.com/github/CCPBioSim/Into_to_MD_simulation_and_analysis/blob/main/8_Analysis_classification/1_classification.ipynb) |
 
 
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