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--- | ||
title: "BioDynaMo Version 1.0 Released" | ||
date: "2021-04-09" | ||
path: "/blog/release_v1.0/" | ||
meta_description: "" | ||
--- | ||
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</br> | ||
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On behalf of the BioDynaMo team I am pleased to announce our first major release: BioDynaMo 1.0. | ||
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The following publication gives a good overview about BioDynaMo's features and capabilities. | ||
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**BioDynaMo: a general platform for scalable agent-based simulation** </br> | ||
*Lukas Breitwieser, Ahmad Hesam, Jean de Montigny, Vasileios Vavourakis, Alexandros Iosif, Jack Jennings, Marcus Kaiser, Marco Manca, Alberto Di Meglio, Zaid Al-Ars, Fons Rademakers, Onur Mutlu, Roman Bauer* </br> | ||
bioRxiv 2020.06.08.139949; doi: https://doi.org/10.1101/2020.06.08.139949 | ||
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Please have a look at the [release notes](/docs/userguide/release_notes_v1.0/), [installation instructions](/docs/userguide/installation/) and [tutorials](/docs/userguide/hello_world/) for further information. | ||
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Thanks and enjoy! </br> | ||
Lukas for the BioDynaMo team | ||
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--- | ||
title: "BioDynaMo Version 1.0 Release Notes" | ||
date: "2020-04-09" | ||
path: "/docs/userguide/release_notes_v1.0/" | ||
toc: true | ||
image: "" | ||
sidebar: "userguide" | ||
keywords: | ||
-release | ||
-v1.0 | ||
-1.0 | ||
--- | ||
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BioDynaMo version 1.0 was released on April 9, 2021. | ||
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The following people have contributed to this first major version | ||
(ordered by number of contributions): | ||
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* Lukas Breitwieser | ||
* Ahmad Hesam | ||
* Fons Rademakers | ||
* Konstantinos Kanellis | ||
* Jean de Montigny | ||
* Roman Bauer | ||
* Giovanni De Toni | ||
* Jack Jennings | ||
* Dorukhan Arslan | ||
* Nam Nguyen | ||
* Johannes Franz | ||
* Lukasz Stempniewicz | ||
* Robert Harakaly | ||
* Sadyksaj | ||
* Tobias Duswald | ||
* Victor Drobny | ||
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## Main features | ||
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* A general API to implement and customize agent-based models | ||
* A fully parallelized, high-performance simulation engine | ||
* Ability to offload computations to GPUs of all major vendors | ||
* Large-scale model support. BioDynaMo can simulate billions of agents on a single server. | ||
* Predefined building blocks for simulations in neuroscience, oncology, and epidemiology | ||
* Support for spherical and cylindrical agent geometries | ||
* Diffusion methods: Euler, Runge-Kutta | ||
* Multi-scale simulation support | ||
* Visualization in ParaView | ||
* Parameter configuration: JSON, C++ interpreter script, command line, or in-code | ||
* Automatic backup and restore functionality using ROOT | ||
* BioDynaMo Notebooks for rapid web-based prototyping | ||
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For a more detailed description of BioDynaMo's features and capabilities, | ||
please have a look at the following publication: | ||
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**BioDynaMo: a general platform for scalable agent-based simulation** </br> | ||
*Lukas Breitwieser, Ahmad Hesam, Jean de Montigny, Vasileios Vavourakis, Alexandros Iosif, Jack Jennings, Marcus Kaiser, Marco Manca, Alberto Di Meglio, Zaid Al-Ars, Fons Rademakers, Onur Mutlu, Roman Bauer* </br> | ||
bioRxiv 2020.06.08.139949; doi: https://doi.org/10.1101/2020.06.08.139949 | ||
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## Demos | ||
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BioDynaMo v1.0 comes with the following demos: | ||
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* Cell division | ||
* Diffusion | ||
* Soma clustering | ||
* Tumor concept | ||
* Epidemiology | ||
* Gene regulation | ||
* Parameters | ||
* Multiple simulations | ||
* Makefile project | ||
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## Supported Platforms | ||
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* Ubuntu 18.04, 20.04 | ||
* CentOS 7 | ||
* macOS 10.15 and macOS 11.1 | ||
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