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AaronRuben/README.md

Hi, I'm Aaron 👋

I'm currently a PhD student in the Lachance Lab at Georgia Tech. I'm broadly interested in developing theoretical models and developing/using computational tools to understand the dynamics and effects of admixture and introgression. Currently, I'm studying the legacy of Neanderthal introgression in diverse human populations.

During my Master's, I developed a tool - MgCod - that detects stop codon reassingments in prokaryotic sequences and annotates coding regions accordingly. The tool was designed with crAss-like phages in mind, which show differential stop codon usage in parts of their genomes.

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  1. gatech-genemark/Mgcod gatech-genemark/Mgcod Public

    Tool for recognizing genetic codes (incl. multiple genetic codes in phage genomes) and genetic-code-informed annotation of coding regions in prokaryotic sequences

    Python 9

  2. LachanceLab/sex_biased_admixture LachanceLab/sex_biased_admixture Public

    Python 4

  3. LachanceLab/AfricanPopulationStructure LachanceLab/AfricanPopulationStructure Public

    Python 3

  4. LachanceLab/GBL LachanceLab/GBL Public

    Python 3

  5. LachanceLab/introgression_theory LachanceLab/introgression_theory Public

    Python 2

  6. allele_age allele_age Public

    Estimating the age of the HOXB13 variant found in West Africa

    Python 1 1