Zoonomia Sequence conservation at cCREs and TFBSs UMAP analysis on cCREs and TFBSs Gene Ontology (GO) enrichment analysis Evolutionary conservation at transcription start sites A convolution neural network for identifying transcription factor binding sites in TF ChIP-seq peaks Benchmarking A statistical method for identifying evolutionarily constrained transcription factor binding sites Identification of bound TF motif instances (TFBSs) Identification of evolutionarily constrained TF motif instances Overlap of TFBSs with TEs in the human genome Mammalian histone modification and TF ChIP-seq data processing Classification of HNF4A, FOXA1, and CEBPA binding sites into enhancers, primed enhancers, and promoters in ten mammals Cell-type-specific DNase cleavage patterns of TFBSs CpG methylation of TFBSs Partitioned LD score regression