diff --git a/cookiecutter-templates/cookiecutter-dioptra-deployment/cookiecutter.json b/cookiecutter-templates/cookiecutter-dioptra-deployment/cookiecutter.json index d39c8aa3e..644b20d2d 100644 --- a/cookiecutter-templates/cookiecutter-dioptra-deployment/cookiecutter.json +++ b/cookiecutter-templates/cookiecutter-dioptra-deployment/cookiecutter.json @@ -66,7 +66,7 @@ "argbash": { "image": "argbash", "namespace": "matejak", - "tag": "latest", + "tag": "sha-0d046ad", "registry": "" }, "db": { @@ -78,7 +78,7 @@ "dbadmin": { "image": "pgadmin4", "namespace": "dpage", - "tag": "latest", + "tag": "8.12", "registry": "" }, "mc": { @@ -90,19 +90,19 @@ "minio": { "image": "minio", "namespace": "minio", - "tag": "latest", + "tag": "RELEASE.2024-07-16T23-46-41Z", "registry": "" }, "nodejs": { "image": "node", "namespace": "", - "tag": "18", + "tag": "22.5.1", "registry": "" }, "redis": { "image": "redis", "namespace": "", - "tag": "latest", + "tag": "7.2.6", "registry": "" } }, diff --git a/docker/requirements/linux-amd64-py3.11-mlflow-tracking-requirements.txt b/docker/requirements/linux-amd64-py3.11-mlflow-tracking-requirements.txt index 8c305893f..dddb53d9c 100644 --- a/docker/requirements/linux-amd64-py3.11-mlflow-tracking-requirements.txt +++ b/docker/requirements/linux-amd64-py3.11-mlflow-tracking-requirements.txt @@ -4,65 +4,69 @@ # # pip-compile --output-file=venvs/linux-amd64-py3.11-mlflow-tracking-requirements.txt docker/pip-tools/mlflow-tracking-requirements.in # -alembic==1.13.2 +alembic==1.13.3 # via mlflow -aniso8601==9.0.1 - # via graphene blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via -r docker/pip-tools/mlflow-tracking-requirements.in -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -cachetools==5.3.3 - # via mlflow -certifi==2024.7.4 +cachetools==5.5.0 + # via + # google-auth + # mlflow-skinny +certifi==2024.8.30 # via requests -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via # flask - # mlflow -cloudpickle==3.0.0 - # via mlflow -contourpy==1.2.1 + # mlflow-skinny +cloudpickle==3.1.0 + # via mlflow-skinny +contourpy==1.3.0 # via matplotlib cycler==0.12.1 # via matplotlib +databricks-sdk==0.36.0 + # via mlflow-skinny deprecated==1.2.14 - # via opentelemetry-api + # via + # opentelemetry-api + # opentelemetry-semantic-conventions docker==7.1.0 # via mlflow -entrypoints==0.4 - # via mlflow flask==3.0.3 # via mlflow -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow -idna==3.7 +idna==3.10 # via requests -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via - # mlflow + # mlflow-skinny # opentelemetry-api itsdangerous==2.2.0 # via flask @@ -76,22 +80,24 @@ jmespath==1.0.1 # botocore joblib==1.4.2 # via scikit-learn -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via mlflow -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # werkzeug -matplotlib==3.9.1 +matplotlib==3.9.2 # via mlflow -mlflow==2.14.2 +mlflow==2.17.1 # via -r docker/pip-tools/mlflow-tracking-requirements.in -numpy==1.26.4 +mlflow-skinny==2.17.1 + # via mlflow +numpy==2.1.2 # via # contourpy # matplotlib @@ -100,88 +106,93 @@ numpy==1.26.4 # pyarrow # scikit-learn # scipy -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk packaging==24.1 # via # gunicorn # matplotlib - # mlflow -pandas==2.2.2 + # mlflow-skinny +pandas==2.2.3 # via mlflow -pillow==10.4.0 +pillow==11.0.0 # via matplotlib -protobuf==4.25.3 - # via mlflow -psycopg2-binary==2.9.9 +protobuf==5.28.3 + # via mlflow-skinny +psycopg2-binary==2.9.10 # via -r docker/pip-tools/mlflow-tracking-requirements.in -pyarrow==15.0.2 +pyarrow==17.0.0 # via mlflow -pyparsing==3.1.2 +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth +pyparsing==3.2.0 # via matplotlib python-dateutil==2.9.0.post0 # via # botocore + # graphene # matplotlib # pandas -pytz==2024.1 - # via - # mlflow - # pandas -pyyaml==6.0.1 - # via mlflow -querystring-parser==1.2.4 - # via mlflow +pytz==2024.2 + # via pandas +pyyaml==6.0.2 + # via mlflow-skinny requests==2.32.3 # via + # databricks-sdk # docker - # mlflow -s3transfer==0.10.2 + # mlflow-skinny +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via mlflow -scipy==1.14.0 +scipy==1.14.1 # via # mlflow # scikit-learn -simplejson==3.19.2 +simplejson==3.19.3 # via -r docker/pip-tools/mlflow-tracking-requirements.in six==1.16.0 - # via - # python-dateutil - # querystring-parser + # via python-dateutil smmap==5.0.1 # via gitdb -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny threadpoolctl==3.5.0 # via scikit-learn typing-extensions==4.12.2 # via # alembic + # graphene # opentelemetry-sdk # sqlalchemy -tzdata==2024.1 +tzdata==2024.2 # via pandas -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # docker # requests -werkzeug==3.0.3 +werkzeug==3.0.6 # via flask wrapt==1.16.0 # via deprecated -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata diff --git a/docker/requirements/linux-amd64-py3.11-pytorch-cpu-requirements.txt b/docker/requirements/linux-amd64-py3.11-pytorch-cpu-requirements.txt index b2e2c0152..3afff9e14 100644 --- a/docker/requirements/linux-amd64-py3.11-pytorch-cpu-requirements.txt +++ b/docker/requirements/linux-amd64-py3.11-pytorch-cpu-requirements.txt @@ -8,36 +8,36 @@ absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -alembic==1.13.2 +alembic==1.13.3 # via # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene + # via flask-restx async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # jsonschema # referencing blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -cachetools==5.3.3 - # via mlflow -certifi==2024.7.4 +cachetools==5.5.0 + # via + # google-auth + # mlflow-skinny +certifi==2024.8.30 # via requests -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -45,38 +45,40 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect +databricks-sdk==0.36.0 + # via mlflow-skinny deprecated==1.2.14 - # via opentelemetry-api -distributed==2024.6.2 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distributed==2024.10.0 # via prefect docker==7.1.0 # via # mlflow # prefect entrypoints==0.4 - # via - # dioptra (pyproject.toml) - # mlflow -filelock==3.15.4 + # via dioptra (pyproject.toml) +filelock==3.16.1 # via # torch # triton @@ -89,9 +91,9 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via dioptra (pyproject.toml) flask-login==0.6.3 # via dioptra (pyproject.toml) @@ -105,48 +107,50 @@ flask-sqlalchemy==3.1.1 # via # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # torch gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow -idna==3.7 +idna==3.10 # via requests -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect -injector==0.21.0 +injector==0.22.0 # via dioptra (pyproject.toml) itsdangerous==2.2.0 # via flask @@ -162,13 +166,13 @@ jmespath==1.0.1 # botocore joblib==1.4.2 # via scikit-learn -jsonschema==4.22.0 +jsonschema==4.23.0 # via # dioptra (pyproject.toml) # flask-restx -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -176,20 +180,20 @@ locket==1.0.0 # via # distributed # partd -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra (pyproject.toml) # flask-accepts @@ -197,20 +201,21 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools mdurl==0.1.2 # via markdown-it-py -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) +mlflow-skinny==2.17.1 + # via mlflow mpmath==1.3.0 # via sympy -msgpack==1.0.8 +msgpack==1.1.0 # via # distributed # prefect @@ -218,11 +223,11 @@ multimethod==1.12 # via dioptra (pyproject.toml) mypy-extensions==1.0.0 # via prefect -networkx==3.3 +networkx==3.4.2 # via # scikit-image # torch -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -237,9 +242,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -276,7 +279,7 @@ nvidia-cusparse-cu12==12.1.0.106 # torch nvidia-nccl-cu12==2.19.3 # via torch -nvidia-nvjitlink-cu12==12.5.82 +nvidia-nvjitlink-cu12==12.6.77 # via # nvidia-cusolver-cu12 # nvidia-cusparse-cu12 @@ -286,16 +289,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk packaging==24.1 # via @@ -305,10 +306,11 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # prefect # scikit-image -pandas==2.2.2 + # tensorboard +pandas==2.2.3 # via # dioptra (pyproject.toml) # mlflow @@ -318,7 +320,7 @@ passlib==1.7.4 # via dioptra (pyproject.toml) pendulum==3.0.0 # via prefect -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -330,27 +332,31 @@ pillow==10.4.0 # torchvision prefect==1.4.1 # via dioptra (pyproject.toml) -protobuf==4.25.3 +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via distributed -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk pygments==2.18.0 # via rich -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra (pyproject.toml) # matplotlib @@ -361,6 +367,7 @@ python-dateutil==2.9.0.post0 # botocore # croniter # dioptra (pyproject.toml) + # graphene # matplotlib # pandas # pendulum @@ -370,25 +377,20 @@ python-json-logger==2.0.7 # via dioptra (pyproject.toml) python-slugify==8.0.4 # via prefect -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # dask # dioptra (pyproject.toml) # distributed - # mlflow + # mlflow-skinny # prefect -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra (pyproject.toml) # rq @@ -398,49 +400,50 @@ referencing==0.35.1 # jsonschema-specifications requests==2.32.3 # via + # databricks-sdk # dioptra (pyproject.toml) # docker - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via # adversarial-robustness-toolbox # imgaug # python-dateutil - # querystring-parser # tensorboard smmap==5.0.1 # via gitdb @@ -473,23 +476,23 @@ smqtk-image-io==0.17.1 # smqtk-detection sortedcontainers==2.4.0 # via distributed -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow -structlog==24.2.0 +sqlparse==0.5.1 + # via mlflow-skinny +structlog==24.4.0 # via dioptra (pyproject.toml) -sympy==1.12.1 +sympy==1.13.3 # via torch tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -497,13 +500,13 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum toml==0.10.2 # via prefect -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -519,7 +522,7 @@ torchvision==0.17.2 # via -r requirements-dev-pytorch.in tornado==6.4.1 # via distributed -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # nrtk @@ -529,21 +532,22 @@ typing-extensions==4.12.2 # via # alembic # dioptra (pyproject.toml) + # graphene # opentelemetry-sdk # sqlalchemy # torch -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed # docker # prefect # requests -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra (pyproject.toml) # flask @@ -555,7 +559,7 @@ wrapt==1.16.0 # via deprecated zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/docker/requirements/linux-amd64-py3.11-pytorch-gpu-requirements.txt b/docker/requirements/linux-amd64-py3.11-pytorch-gpu-requirements.txt index 516be686f..5bca152f4 100644 --- a/docker/requirements/linux-amd64-py3.11-pytorch-gpu-requirements.txt +++ b/docker/requirements/linux-amd64-py3.11-pytorch-gpu-requirements.txt @@ -8,36 +8,36 @@ absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -alembic==1.13.2 +alembic==1.13.3 # via # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene + # via flask-restx async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # jsonschema # referencing blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -cachetools==5.3.3 - # via mlflow -certifi==2024.7.4 +cachetools==5.5.0 + # via + # google-auth + # mlflow-skinny +certifi==2024.8.30 # via requests -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -45,38 +45,40 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect +databricks-sdk==0.36.0 + # via mlflow-skinny deprecated==1.2.14 - # via opentelemetry-api -distributed==2024.6.2 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distributed==2024.10.0 # via prefect docker==7.1.0 # via # mlflow # prefect entrypoints==0.4 - # via - # dioptra (pyproject.toml) - # mlflow -filelock==3.15.4 + # via dioptra (pyproject.toml) +filelock==3.16.1 # via # torch # triton @@ -89,9 +91,9 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via dioptra (pyproject.toml) flask-login==0.6.3 # via dioptra (pyproject.toml) @@ -105,48 +107,50 @@ flask-sqlalchemy==3.1.1 # via # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # torch gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow -idna==3.7 +idna==3.10 # via requests -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect -injector==0.21.0 +injector==0.22.0 # via dioptra (pyproject.toml) itsdangerous==2.2.0 # via flask @@ -162,13 +166,13 @@ jmespath==1.0.1 # botocore joblib==1.4.2 # via scikit-learn -jsonschema==4.22.0 +jsonschema==4.23.0 # via # dioptra (pyproject.toml) # flask-restx -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -176,20 +180,20 @@ locket==1.0.0 # via # distributed # partd -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra (pyproject.toml) # flask-accepts @@ -197,20 +201,21 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools mdurl==0.1.2 # via markdown-it-py -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) +mlflow-skinny==2.17.1 + # via mlflow mpmath==1.3.0 # via sympy -msgpack==1.0.8 +msgpack==1.1.0 # via # distributed # prefect @@ -218,11 +223,11 @@ multimethod==1.12 # via dioptra (pyproject.toml) mypy-extensions==1.0.0 # via prefect -networkx==3.3 +networkx==3.4.2 # via # scikit-image # torch -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -237,9 +242,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -276,7 +279,7 @@ nvidia-cusparse-cu12==12.1.0.106 # torch nvidia-nccl-cu12==2.19.3 # via torch -nvidia-nvjitlink-cu12==12.5.82 +nvidia-nvjitlink-cu12==12.6.77 # via # nvidia-cusolver-cu12 # nvidia-cusparse-cu12 @@ -286,16 +289,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk packaging==24.1 # via @@ -305,10 +306,11 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # prefect # scikit-image -pandas==2.2.2 + # tensorboard +pandas==2.2.3 # via # dioptra (pyproject.toml) # mlflow @@ -318,7 +320,7 @@ passlib==1.7.4 # via dioptra (pyproject.toml) pendulum==3.0.0 # via prefect -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -330,27 +332,31 @@ pillow==10.4.0 # torchvision prefect==1.4.1 # via dioptra (pyproject.toml) -protobuf==4.25.3 +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via distributed -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk pygments==2.18.0 # via rich -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra (pyproject.toml) # matplotlib @@ -361,6 +367,7 @@ python-dateutil==2.9.0.post0 # botocore # croniter # dioptra (pyproject.toml) + # graphene # matplotlib # pandas # pendulum @@ -370,25 +377,20 @@ python-json-logger==2.0.7 # via dioptra (pyproject.toml) python-slugify==8.0.4 # via prefect -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # dask # dioptra (pyproject.toml) # distributed - # mlflow + # mlflow-skinny # prefect -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra (pyproject.toml) # rq @@ -398,49 +400,50 @@ referencing==0.35.1 # jsonschema-specifications requests==2.32.3 # via + # databricks-sdk # dioptra (pyproject.toml) # docker - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via # adversarial-robustness-toolbox # imgaug # python-dateutil - # querystring-parser # tensorboard smmap==5.0.1 # via gitdb @@ -473,23 +476,23 @@ smqtk-image-io==0.17.1 # smqtk-detection sortedcontainers==2.4.0 # via distributed -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow -structlog==24.2.0 +sqlparse==0.5.1 + # via mlflow-skinny +structlog==24.4.0 # via dioptra (pyproject.toml) -sympy==1.12.1 +sympy==1.13.3 # via torch tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -497,13 +500,13 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum toml==0.10.2 # via prefect -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -519,7 +522,7 @@ torchvision==0.17.2 # via -r requirements-dev-pytorch-gpu.in tornado==6.4.1 # via distributed -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # nrtk @@ -529,21 +532,22 @@ typing-extensions==4.12.2 # via # alembic # dioptra (pyproject.toml) + # graphene # opentelemetry-sdk # sqlalchemy # torch -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed # docker # prefect # requests -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra (pyproject.toml) # flask @@ -555,7 +559,7 @@ wrapt==1.16.0 # via deprecated zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/docker/requirements/linux-amd64-py3.11-restapi-requirements.txt b/docker/requirements/linux-amd64-py3.11-restapi-requirements.txt index 3b620afaf..6c22ae8c3 100644 --- a/docker/requirements/linux-amd64-py3.11-restapi-requirements.txt +++ b/docker/requirements/linux-amd64-py3.11-restapi-requirements.txt @@ -4,7 +4,7 @@ # # pip-compile --extra=mlflow-skinny --output-file=venvs/linux-amd64-py3.11-restapi-requirements.txt docker/pip-tools/restapi-requirements.in pyproject.toml # -alembic==1.13.2 +alembic==1.13.3 # via # dioptra (pyproject.toml) # flask-migrate @@ -12,23 +12,25 @@ aniso8601==9.0.1 # via flask-restx async-timeout==4.0.3 # via -r docker/pip-tools/restapi-requirements.in -attrs==23.2.0 +attrs==24.2.0 # via # jsonschema # referencing blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -cachetools==5.3.3 - # via mlflow-skinny -certifi==2024.7.4 +cachetools==5.5.0 + # via + # google-auth + # mlflow-skinny +certifi==2024.8.30 # via requests -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -36,14 +38,16 @@ click==8.1.7 # flask # mlflow-skinny # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 + # via mlflow-skinny +databricks-sdk==0.36.0 # via mlflow-skinny deprecated==1.2.14 - # via opentelemetry-api -entrypoints==0.4 # via - # dioptra (pyproject.toml) - # mlflow-skinny + # opentelemetry-api + # opentelemetry-semantic-conventions +entrypoints==0.4 + # via dioptra (pyproject.toml) flask==3.0.3 # via # dioptra (pyproject.toml) @@ -52,9 +56,9 @@ flask==3.0.3 # flask-migrate # flask-restx # flask-sqlalchemy -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via dioptra (pyproject.toml) flask-login==0.6.3 # via dioptra (pyproject.toml) @@ -72,19 +76,21 @@ gitdb==4.0.11 # via gitpython gitpython==3.1.43 # via mlflow-skinny -greenlet==3.0.3 +google-auth==2.35.0 + # via databricks-sdk +greenlet==3.1.1 # via sqlalchemy -gunicorn==22.0.0 +gunicorn==23.0.0 # via -r docker/pip-tools/restapi-requirements.in -idna==3.7 +idna==3.10 # via requests -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via flask-restx -injector==0.21.0 +injector==0.22.0 # via dioptra (pyproject.toml) itsdangerous==2.2.0 # via flask @@ -94,57 +100,63 @@ jmespath==1.0.1 # via # boto3 # botocore -jsonschema==4.22.0 +jsonschema==4.23.0 # via # dioptra (pyproject.toml) # flask-restx -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -mako==1.3.5 +mako==1.3.6 # via alembic -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra (pyproject.toml) # flask-accepts -mlflow-skinny==2.14.2 +mlflow-skinny==2.17.1 # via dioptra (pyproject.toml) multimethod==1.12 # via dioptra (pyproject.toml) -numpy==2.0.0 +numpy==2.1.2 # via # dioptra (pyproject.toml) # pandas # scipy -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 +opentelemetry-sdk==1.27.0 # via mlflow-skinny -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk packaging==24.1 # via # gunicorn # marshmallow # mlflow-skinny -pandas==2.2.2 +pandas==2.2.3 # via dioptra (pyproject.toml) passlib==1.7.4 # via dioptra (pyproject.toml) -pillow==10.4.0 +pillow==11.0.0 # via -r docker/pip-tools/restapi-requirements.in -protobuf==4.25.3 +protobuf==5.28.3 # via mlflow-skinny -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via -r docker/pip-tools/restapi-requirements.in -pyparsing==3.1.2 +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth +pyparsing==3.2.0 # via dioptra (pyproject.toml) python-dateutil==2.9.0.post0 # via @@ -153,16 +165,15 @@ python-dateutil==2.9.0.post0 # pandas python-json-logger==2.0.7 # via -r docker/pip-tools/restapi-requirements.in -pytz==2024.1 +pytz==2024.2 # via # flask-restx - # mlflow-skinny # pandas -pyyaml==6.0.1 +pyyaml==6.0.2 # via # dioptra (pyproject.toml) # mlflow-skinny -redis==5.0.7 +redis==5.2.0 # via # dioptra (pyproject.toml) # rq @@ -172,32 +183,35 @@ referencing==0.35.1 # jsonschema-specifications requests==2.32.3 # via + # databricks-sdk # dioptra (pyproject.toml) # mlflow-skinny -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scipy==1.14.0 +scipy==1.14.1 # via dioptra (pyproject.toml) -simplejson==3.19.2 +simplejson==3.19.3 # via -r docker/pip-tools/restapi-requirements.in six==1.16.0 # via python-dateutil smmap==5.0.1 # via gitdb -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra (pyproject.toml) # flask-sqlalchemy -sqlparse==0.5.0 +sqlparse==0.5.1 # via mlflow-skinny -structlog==24.2.0 +structlog==24.4.0 # via dioptra (pyproject.toml) typing-extensions==4.12.2 # via @@ -205,13 +219,13 @@ typing-extensions==4.12.2 # dioptra (pyproject.toml) # opentelemetry-sdk # sqlalchemy -tzdata==2024.1 +tzdata==2024.2 # via pandas -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # requests -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra (pyproject.toml) # flask @@ -220,5 +234,5 @@ werkzeug==3.0.3 # flask-restx wrapt==1.16.0 # via deprecated -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata diff --git a/docker/requirements/linux-amd64-py3.11-tensorflow2-cpu-requirements.txt b/docker/requirements/linux-amd64-py3.11-tensorflow2-cpu-requirements.txt index 7caef6c92..adf65b8db 100644 --- a/docker/requirements/linux-amd64-py3.11-tensorflow2-cpu-requirements.txt +++ b/docker/requirements/linux-amd64-py3.11-tensorflow2-cpu-requirements.txt @@ -9,38 +9,38 @@ absl-py==2.1.0 # keras # tensorboard # tensorflow -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -alembic==1.13.2 +alembic==1.13.3 # via # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene + # via flask-restx astunparse==1.6.3 # via tensorflow async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # jsonschema # referencing blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -cachetools==5.3.3 - # via mlflow -certifi==2024.7.4 +cachetools==5.5.0 + # via + # google-auth + # mlflow-skinny +certifi==2024.8.30 # via requests -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -48,37 +48,39 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect +databricks-sdk==0.36.0 + # via mlflow-skinny deprecated==1.2.14 - # via opentelemetry-api -distributed==2024.6.2 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distributed==2024.10.0 # via prefect docker==7.1.0 # via # mlflow # prefect entrypoints==0.4 - # via - # dioptra (pyproject.toml) - # mlflow + # via dioptra (pyproject.toml) flask==3.0.3 # via # dioptra (pyproject.toml) @@ -88,9 +90,9 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via dioptra (pyproject.toml) flask-login==0.6.3 # via dioptra (pyproject.toml) @@ -106,56 +108,58 @@ flask-sqlalchemy==3.1.1 # flask-migrate flatbuffers==24.3.25 # via tensorflow -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib -fsspec==2024.6.1 +fsspec==2024.10.0 # via dask gast==0.6.0 # via tensorflow gitdb==4.0.11 # via gitpython gitpython==3.1.43 - # via mlflow + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk google-pasta==0.2.0 # via tensorflow -graphene==3.3 +graphene==3.4.1 # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via # tensorboard # tensorflow -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow -h5py==3.11.0 +h5py==3.12.1 # via # keras # tensorflow -idna==3.7 +idna==3.10 # via requests -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect -injector==0.21.0 +injector==0.22.0 # via dioptra (pyproject.toml) itsdangerous==2.2.0 # via flask @@ -170,15 +174,15 @@ jmespath==1.0.1 # botocore joblib==1.4.2 # via scikit-learn -jsonschema==4.22.0 +jsonschema==4.23.0 # via # dioptra (pyproject.toml) # flask-restx -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -keras==3.4.1 +keras==3.6.0 # via tensorflow -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -188,20 +192,20 @@ locket==1.0.0 # via # distributed # partd -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra (pyproject.toml) # flask-accepts @@ -209,12 +213,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools mdurl==0.1.2 # via markdown-it-py @@ -222,9 +225,11 @@ ml-dtypes==0.3.2 # via # keras # tensorflow -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect @@ -234,9 +239,9 @@ mypy-extensions==1.0.0 # via prefect namex==0.0.8 # via keras -networkx==3.3 +networkx==3.4.2 # via scikit-image -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -252,12 +257,9 @@ numpy==1.26.4 # mlflow # nrtk # opencv-python - # opt-einsum # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -273,20 +275,18 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk -opt-einsum==3.3.0 +opt-einsum==3.4.0 # via tensorflow -optree==0.12.0 +optree==0.13.0 # via keras packaging==24.1 # via @@ -297,11 +297,11 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # prefect # scikit-image # tensorflow -pandas==2.2.2 +pandas==2.2.3 # via # dioptra (pyproject.toml) # mlflow @@ -311,7 +311,7 @@ passlib==1.7.4 # via dioptra (pyproject.toml) pendulum==3.0.0 # via prefect -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -322,28 +322,32 @@ pillow==10.4.0 # smqtk-image-io prefect==1.4.1 # via dioptra (pyproject.toml) -protobuf==4.25.3 +protobuf==4.25.5 # via - # mlflow + # mlflow-skinny # tensorboard # tensorflow -psutil==6.0.0 +psutil==6.1.0 # via distributed -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk pygments==2.18.0 # via rich -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra (pyproject.toml) # matplotlib @@ -354,6 +358,7 @@ python-dateutil==2.9.0.post0 # botocore # croniter # dioptra (pyproject.toml) + # graphene # matplotlib # pandas # pendulum @@ -363,25 +368,20 @@ python-json-logger==2.0.7 # via dioptra (pyproject.toml) python-slugify==8.0.4 # via prefect -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # dask # dioptra (pyproject.toml) # distributed - # mlflow + # mlflow-skinny # prefect -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra (pyproject.toml) # rq @@ -391,45 +391,47 @@ referencing==0.35.1 # jsonschema-specifications requests==2.32.3 # via + # databricks-sdk # dioptra (pyproject.toml) # docker - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # tensorflow -rich==13.7.1 +rich==13.9.3 # via # dioptra (pyproject.toml) # keras -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -438,7 +440,6 @@ six==1.16.0 # google-pasta # imgaug # python-dateutil - # querystring-parser # tensorboard # tensorflow smmap==5.0.1 @@ -472,15 +473,15 @@ smqtk-image-io==0.17.1 # smqtk-detection sortedcontainers==2.4.0 # via distributed -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow -structlog==24.2.0 +sqlparse==0.5.1 + # via mlflow-skinny +structlog==24.4.0 # via dioptra (pyproject.toml) tabulate==0.9.0 # via prefect @@ -496,26 +497,26 @@ tensorflow==2.16.1 # via -r requirements-dev-tensorflow.in tensorflow-io-gcs-filesystem==0.37.1 # via tensorflow -termcolor==2.4.0 +termcolor==2.5.0 # via tensorflow text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum toml==0.10.2 # via prefect -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed # partd tornado==6.4.1 # via distributed -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # nrtk @@ -523,22 +524,23 @@ typing-extensions==4.12.2 # via # alembic # dioptra (pyproject.toml) + # graphene # opentelemetry-sdk # optree # sqlalchemy # tensorflow -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed # docker # prefect # requests -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra (pyproject.toml) # flask @@ -546,7 +548,7 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via astunparse wrapt==1.16.0 # via @@ -554,7 +556,7 @@ wrapt==1.16.0 # tensorflow zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/docker/requirements/linux-amd64-py3.11-tensorflow2-gpu-requirements.txt b/docker/requirements/linux-amd64-py3.11-tensorflow2-gpu-requirements.txt index d48408eff..73043d604 100644 --- a/docker/requirements/linux-amd64-py3.11-tensorflow2-gpu-requirements.txt +++ b/docker/requirements/linux-amd64-py3.11-tensorflow2-gpu-requirements.txt @@ -9,38 +9,38 @@ absl-py==2.1.0 # keras # tensorboard # tensorflow -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -alembic==1.13.2 +alembic==1.13.3 # via # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene + # via flask-restx astunparse==1.6.3 # via tensorflow async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # jsonschema # referencing blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -cachetools==5.3.3 - # via mlflow -certifi==2024.7.4 +cachetools==5.5.0 + # via + # google-auth + # mlflow-skinny +certifi==2024.8.30 # via requests -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -48,37 +48,39 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect +databricks-sdk==0.36.0 + # via mlflow-skinny deprecated==1.2.14 - # via opentelemetry-api -distributed==2024.6.2 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distributed==2024.10.0 # via prefect docker==7.1.0 # via # mlflow # prefect entrypoints==0.4 - # via - # dioptra (pyproject.toml) - # mlflow + # via dioptra (pyproject.toml) flask==3.0.3 # via # dioptra (pyproject.toml) @@ -88,9 +90,9 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via dioptra (pyproject.toml) flask-login==0.6.3 # via dioptra (pyproject.toml) @@ -106,56 +108,58 @@ flask-sqlalchemy==3.1.1 # flask-migrate flatbuffers==24.3.25 # via tensorflow -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib -fsspec==2024.6.1 +fsspec==2024.10.0 # via dask gast==0.6.0 # via tensorflow gitdb==4.0.11 # via gitpython gitpython==3.1.43 - # via mlflow + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk google-pasta==0.2.0 # via tensorflow -graphene==3.3 +graphene==3.4.1 # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via # tensorboard # tensorflow -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow -h5py==3.11.0 +h5py==3.12.1 # via # keras # tensorflow -idna==3.7 +idna==3.10 # via requests -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect -injector==0.21.0 +injector==0.22.0 # via dioptra (pyproject.toml) itsdangerous==2.2.0 # via flask @@ -170,15 +174,15 @@ jmespath==1.0.1 # botocore joblib==1.4.2 # via scikit-learn -jsonschema==4.22.0 +jsonschema==4.23.0 # via # dioptra (pyproject.toml) # flask-restx -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -keras==3.4.1 +keras==3.6.0 # via tensorflow -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -188,20 +192,20 @@ locket==1.0.0 # via # distributed # partd -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra (pyproject.toml) # flask-accepts @@ -209,12 +213,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools mdurl==0.1.2 # via markdown-it-py @@ -222,9 +225,11 @@ ml-dtypes==0.3.2 # via # keras # tensorflow -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect @@ -234,9 +239,9 @@ mypy-extensions==1.0.0 # via prefect namex==0.0.8 # via keras -networkx==3.3 +networkx==3.4.2 # via scikit-image -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -252,12 +257,9 @@ numpy==1.26.4 # mlflow # nrtk # opencv-python - # opt-einsum # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -307,20 +309,18 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk -opt-einsum==3.3.0 +opt-einsum==3.4.0 # via tensorflow -optree==0.12.0 +optree==0.13.0 # via keras packaging==24.1 # via @@ -331,11 +331,11 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # prefect # scikit-image # tensorflow -pandas==2.2.2 +pandas==2.2.3 # via # dioptra (pyproject.toml) # mlflow @@ -345,7 +345,7 @@ passlib==1.7.4 # via dioptra (pyproject.toml) pendulum==3.0.0 # via prefect -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -356,28 +356,32 @@ pillow==10.4.0 # smqtk-image-io prefect==1.4.1 # via dioptra (pyproject.toml) -protobuf==4.25.3 +protobuf==4.25.5 # via - # mlflow + # mlflow-skinny # tensorboard # tensorflow -psutil==6.0.0 +psutil==6.1.0 # via distributed -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk pygments==2.18.0 # via rich -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra (pyproject.toml) # matplotlib @@ -388,6 +392,7 @@ python-dateutil==2.9.0.post0 # botocore # croniter # dioptra (pyproject.toml) + # graphene # matplotlib # pandas # pendulum @@ -397,25 +402,20 @@ python-json-logger==2.0.7 # via dioptra (pyproject.toml) python-slugify==8.0.4 # via prefect -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # dask # dioptra (pyproject.toml) # distributed - # mlflow + # mlflow-skinny # prefect -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra (pyproject.toml) # rq @@ -425,45 +425,47 @@ referencing==0.35.1 # jsonschema-specifications requests==2.32.3 # via + # databricks-sdk # dioptra (pyproject.toml) # docker - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # tensorflow -rich==13.7.1 +rich==13.9.3 # via # dioptra (pyproject.toml) # keras -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -472,7 +474,6 @@ six==1.16.0 # google-pasta # imgaug # python-dateutil - # querystring-parser # tensorboard # tensorflow smmap==5.0.1 @@ -506,15 +507,15 @@ smqtk-image-io==0.17.1 # smqtk-detection sortedcontainers==2.4.0 # via distributed -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow -structlog==24.2.0 +sqlparse==0.5.1 + # via mlflow-skinny +structlog==24.4.0 # via dioptra (pyproject.toml) tabulate==0.9.0 # via prefect @@ -530,26 +531,26 @@ tensorflow[and-cuda]==2.16.1 ; sys_platform == "linux" and (platform_machine == # via -r requirements-dev-tensorflow-gpu.in tensorflow-io-gcs-filesystem==0.37.1 # via tensorflow -termcolor==2.4.0 +termcolor==2.5.0 # via tensorflow text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum toml==0.10.2 # via prefect -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed # partd tornado==6.4.1 # via distributed -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # nrtk @@ -557,22 +558,23 @@ typing-extensions==4.12.2 # via # alembic # dioptra (pyproject.toml) + # graphene # opentelemetry-sdk # optree # sqlalchemy # tensorflow -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed # docker # prefect # requests -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra (pyproject.toml) # flask @@ -580,7 +582,7 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via astunparse wrapt==1.16.0 # via @@ -588,7 +590,7 @@ wrapt==1.16.0 # tensorflow zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/docker/requirements/linux-arm64-py3.11-mlflow-tracking-requirements.txt b/docker/requirements/linux-arm64-py3.11-mlflow-tracking-requirements.txt index b5b10f3fc..3e41be0c0 100644 --- a/docker/requirements/linux-arm64-py3.11-mlflow-tracking-requirements.txt +++ b/docker/requirements/linux-arm64-py3.11-mlflow-tracking-requirements.txt @@ -4,65 +4,69 @@ # # pip-compile --output-file=venvs/linux-arm64-py3.11-mlflow-tracking-requirements.txt docker/pip-tools/mlflow-tracking-requirements.in # -alembic==1.13.2 +alembic==1.13.3 # via mlflow -aniso8601==9.0.1 - # via graphene blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via -r docker/pip-tools/mlflow-tracking-requirements.in -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -cachetools==5.3.3 - # via mlflow -certifi==2024.7.4 +cachetools==5.5.0 + # via + # google-auth + # mlflow-skinny +certifi==2024.8.30 # via requests -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via # flask - # mlflow -cloudpickle==3.0.0 - # via mlflow -contourpy==1.2.1 + # mlflow-skinny +cloudpickle==3.1.0 + # via mlflow-skinny +contourpy==1.3.0 # via matplotlib cycler==0.12.1 # via matplotlib +databricks-sdk==0.36.0 + # via mlflow-skinny deprecated==1.2.14 - # via opentelemetry-api + # via + # opentelemetry-api + # opentelemetry-semantic-conventions docker==7.1.0 # via mlflow -entrypoints==0.4 - # via mlflow flask==3.0.3 # via mlflow -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow -idna==3.7 +idna==3.10 # via requests -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via - # mlflow + # mlflow-skinny # opentelemetry-api itsdangerous==2.2.0 # via flask @@ -76,22 +80,24 @@ jmespath==1.0.1 # botocore joblib==1.4.2 # via scikit-learn -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via mlflow -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # werkzeug -matplotlib==3.9.1 +matplotlib==3.9.2 # via mlflow -mlflow==2.14.2 +mlflow==2.17.1 # via -r docker/pip-tools/mlflow-tracking-requirements.in -numpy==1.26.4 +mlflow-skinny==2.17.1 + # via mlflow +numpy==2.1.2 # via # contourpy # matplotlib @@ -100,88 +106,93 @@ numpy==1.26.4 # pyarrow # scikit-learn # scipy -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk packaging==24.1 # via # gunicorn # matplotlib - # mlflow -pandas==2.2.2 + # mlflow-skinny +pandas==2.2.3 # via mlflow -pillow==10.4.0 +pillow==11.0.0 # via matplotlib -protobuf==4.25.3 - # via mlflow -psycopg2-binary==2.9.9 +protobuf==5.28.3 + # via mlflow-skinny +psycopg2-binary==2.9.10 # via -r docker/pip-tools/mlflow-tracking-requirements.in -pyarrow==15.0.2 +pyarrow==17.0.0 # via mlflow -pyparsing==3.1.2 +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth +pyparsing==3.2.0 # via matplotlib python-dateutil==2.9.0.post0 # via # botocore + # graphene # matplotlib # pandas -pytz==2024.1 - # via - # mlflow - # pandas -pyyaml==6.0.1 - # via mlflow -querystring-parser==1.2.4 - # via mlflow +pytz==2024.2 + # via pandas +pyyaml==6.0.2 + # via mlflow-skinny requests==2.32.3 # via + # databricks-sdk # docker - # mlflow -s3transfer==0.10.2 + # mlflow-skinny +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via mlflow -scipy==1.14.0 +scipy==1.14.1 # via # mlflow # scikit-learn -simplejson==3.19.2 +simplejson==3.19.3 # via -r docker/pip-tools/mlflow-tracking-requirements.in six==1.16.0 - # via - # python-dateutil - # querystring-parser + # via python-dateutil smmap==5.0.1 # via gitdb -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny threadpoolctl==3.5.0 # via scikit-learn typing-extensions==4.12.2 # via # alembic + # graphene # opentelemetry-sdk # sqlalchemy -tzdata==2024.1 +tzdata==2024.2 # via pandas -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # docker # requests -werkzeug==3.0.3 +werkzeug==3.0.6 # via flask wrapt==1.16.0 # via deprecated -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata diff --git a/docker/requirements/linux-arm64-py3.11-pytorch-cpu-requirements.txt b/docker/requirements/linux-arm64-py3.11-pytorch-cpu-requirements.txt index 10fec1a4c..6ca236a99 100644 --- a/docker/requirements/linux-arm64-py3.11-pytorch-cpu-requirements.txt +++ b/docker/requirements/linux-arm64-py3.11-pytorch-cpu-requirements.txt @@ -8,36 +8,36 @@ absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -alembic==1.13.2 +alembic==1.13.3 # via # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene + # via flask-restx async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # jsonschema # referencing blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -cachetools==5.3.3 - # via mlflow -certifi==2024.7.4 +cachetools==5.5.0 + # via + # google-auth + # mlflow-skinny +certifi==2024.8.30 # via requests -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -45,38 +45,40 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect +databricks-sdk==0.36.0 + # via mlflow-skinny deprecated==1.2.14 - # via opentelemetry-api -distributed==2024.6.2 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distributed==2024.10.0 # via prefect docker==7.1.0 # via # mlflow # prefect entrypoints==0.4 - # via - # dioptra (pyproject.toml) - # mlflow -filelock==3.15.4 + # via dioptra (pyproject.toml) +filelock==3.16.1 # via torch flask==3.0.3 # via @@ -87,9 +89,9 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via dioptra (pyproject.toml) flask-login==0.6.3 # via dioptra (pyproject.toml) @@ -103,48 +105,50 @@ flask-sqlalchemy==3.1.1 # via # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # torch gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow -idna==3.7 +idna==3.10 # via requests -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect -injector==0.21.0 +injector==0.22.0 # via dioptra (pyproject.toml) itsdangerous==2.2.0 # via flask @@ -160,13 +164,13 @@ jmespath==1.0.1 # botocore joblib==1.4.2 # via scikit-learn -jsonschema==4.22.0 +jsonschema==4.23.0 # via # dioptra (pyproject.toml) # flask-restx -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -174,20 +178,20 @@ locket==1.0.0 # via # distributed # partd -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra (pyproject.toml) # flask-accepts @@ -195,20 +199,21 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools mdurl==0.1.2 # via markdown-it-py -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) +mlflow-skinny==2.17.1 + # via mlflow mpmath==1.3.0 # via sympy -msgpack==1.0.8 +msgpack==1.1.0 # via # distributed # prefect @@ -216,11 +221,11 @@ multimethod==1.12 # via dioptra (pyproject.toml) mypy-extensions==1.0.0 # via prefect -networkx==3.3 +networkx==3.4.2 # via # scikit-image # torch -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -235,9 +240,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -253,16 +256,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk packaging==24.1 # via @@ -272,10 +273,11 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # prefect # scikit-image -pandas==2.2.2 + # tensorboard +pandas==2.2.3 # via # dioptra (pyproject.toml) # mlflow @@ -285,7 +287,7 @@ passlib==1.7.4 # via dioptra (pyproject.toml) pendulum==3.0.0 # via prefect -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -297,27 +299,31 @@ pillow==10.4.0 # torchvision prefect==1.4.1 # via dioptra (pyproject.toml) -protobuf==4.25.3 +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via distributed -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk pygments==2.18.0 # via rich -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra (pyproject.toml) # matplotlib @@ -328,6 +334,7 @@ python-dateutil==2.9.0.post0 # botocore # croniter # dioptra (pyproject.toml) + # graphene # matplotlib # pandas # pendulum @@ -337,25 +344,20 @@ python-json-logger==2.0.7 # via dioptra (pyproject.toml) python-slugify==8.0.4 # via prefect -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # dask # dioptra (pyproject.toml) # distributed - # mlflow + # mlflow-skinny # prefect -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra (pyproject.toml) # rq @@ -365,49 +367,50 @@ referencing==0.35.1 # jsonschema-specifications requests==2.32.3 # via + # databricks-sdk # dioptra (pyproject.toml) # docker - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via # adversarial-robustness-toolbox # imgaug # python-dateutil - # querystring-parser # tensorboard smmap==5.0.1 # via gitdb @@ -440,23 +443,23 @@ smqtk-image-io==0.17.1 # smqtk-detection sortedcontainers==2.4.0 # via distributed -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow -structlog==24.2.0 +sqlparse==0.5.1 + # via mlflow-skinny +structlog==24.4.0 # via dioptra (pyproject.toml) -sympy==1.12.1 +sympy==1.13.3 # via torch tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -464,13 +467,13 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum toml==0.10.2 # via prefect -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -486,7 +489,7 @@ torchvision==0.17.2 # via -r requirements-dev-pytorch.in tornado==6.4.1 # via distributed -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # nrtk @@ -494,21 +497,22 @@ typing-extensions==4.12.2 # via # alembic # dioptra (pyproject.toml) + # graphene # opentelemetry-sdk # sqlalchemy # torch -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed # docker # prefect # requests -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra (pyproject.toml) # flask @@ -520,7 +524,7 @@ wrapt==1.16.0 # via deprecated zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/docker/requirements/linux-arm64-py3.11-restapi-requirements.txt b/docker/requirements/linux-arm64-py3.11-restapi-requirements.txt index f057c23e4..0ce335e38 100644 --- a/docker/requirements/linux-arm64-py3.11-restapi-requirements.txt +++ b/docker/requirements/linux-arm64-py3.11-restapi-requirements.txt @@ -4,7 +4,7 @@ # # pip-compile --extra=mlflow-skinny --output-file=venvs/linux-arm64-py3.11-restapi-requirements.txt docker/pip-tools/restapi-requirements.in pyproject.toml # -alembic==1.13.2 +alembic==1.13.3 # via # dioptra (pyproject.toml) # flask-migrate @@ -12,23 +12,25 @@ aniso8601==9.0.1 # via flask-restx async-timeout==4.0.3 # via -r docker/pip-tools/restapi-requirements.in -attrs==23.2.0 +attrs==24.2.0 # via # jsonschema # referencing blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -cachetools==5.3.3 - # via mlflow-skinny -certifi==2024.7.4 +cachetools==5.5.0 + # via + # google-auth + # mlflow-skinny +certifi==2024.8.30 # via requests -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -36,14 +38,16 @@ click==8.1.7 # flask # mlflow-skinny # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 + # via mlflow-skinny +databricks-sdk==0.36.0 # via mlflow-skinny deprecated==1.2.14 - # via opentelemetry-api -entrypoints==0.4 # via - # dioptra (pyproject.toml) - # mlflow-skinny + # opentelemetry-api + # opentelemetry-semantic-conventions +entrypoints==0.4 + # via dioptra (pyproject.toml) flask==3.0.3 # via # dioptra (pyproject.toml) @@ -52,9 +56,9 @@ flask==3.0.3 # flask-migrate # flask-restx # flask-sqlalchemy -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via dioptra (pyproject.toml) flask-login==0.6.3 # via dioptra (pyproject.toml) @@ -72,19 +76,21 @@ gitdb==4.0.11 # via gitpython gitpython==3.1.43 # via mlflow-skinny -greenlet==3.0.3 +google-auth==2.35.0 + # via databricks-sdk +greenlet==3.1.1 # via sqlalchemy -gunicorn==22.0.0 +gunicorn==23.0.0 # via -r docker/pip-tools/restapi-requirements.in -idna==3.7 +idna==3.10 # via requests -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via flask-restx -injector==0.21.0 +injector==0.22.0 # via dioptra (pyproject.toml) itsdangerous==2.2.0 # via flask @@ -94,57 +100,63 @@ jmespath==1.0.1 # via # boto3 # botocore -jsonschema==4.22.0 +jsonschema==4.23.0 # via # dioptra (pyproject.toml) # flask-restx -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -mako==1.3.5 +mako==1.3.6 # via alembic -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra (pyproject.toml) # flask-accepts -mlflow-skinny==2.14.2 +mlflow-skinny==2.17.1 # via dioptra (pyproject.toml) multimethod==1.12 # via dioptra (pyproject.toml) -numpy==2.0.0 +numpy==2.1.2 # via # dioptra (pyproject.toml) # pandas # scipy -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 +opentelemetry-sdk==1.27.0 # via mlflow-skinny -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk packaging==24.1 # via # gunicorn # marshmallow # mlflow-skinny -pandas==2.2.2 +pandas==2.2.3 # via dioptra (pyproject.toml) passlib==1.7.4 # via dioptra (pyproject.toml) -pillow==10.4.0 +pillow==11.0.0 # via -r docker/pip-tools/restapi-requirements.in -protobuf==4.25.3 +protobuf==5.28.3 # via mlflow-skinny -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via -r docker/pip-tools/restapi-requirements.in -pyparsing==3.1.2 +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth +pyparsing==3.2.0 # via dioptra (pyproject.toml) python-dateutil==2.9.0.post0 # via @@ -153,16 +165,15 @@ python-dateutil==2.9.0.post0 # pandas python-json-logger==2.0.7 # via -r docker/pip-tools/restapi-requirements.in -pytz==2024.1 +pytz==2024.2 # via # flask-restx - # mlflow-skinny # pandas -pyyaml==6.0.1 +pyyaml==6.0.2 # via # dioptra (pyproject.toml) # mlflow-skinny -redis==5.0.7 +redis==5.2.0 # via # dioptra (pyproject.toml) # rq @@ -172,32 +183,35 @@ referencing==0.35.1 # jsonschema-specifications requests==2.32.3 # via + # databricks-sdk # dioptra (pyproject.toml) # mlflow-skinny -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scipy==1.14.0 +scipy==1.14.1 # via dioptra (pyproject.toml) -simplejson==3.19.2 +simplejson==3.19.3 # via -r docker/pip-tools/restapi-requirements.in six==1.16.0 # via python-dateutil smmap==5.0.1 # via gitdb -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra (pyproject.toml) # flask-sqlalchemy -sqlparse==0.5.0 +sqlparse==0.5.1 # via mlflow-skinny -structlog==24.2.0 +structlog==24.4.0 # via dioptra (pyproject.toml) typing-extensions==4.12.2 # via @@ -205,13 +219,13 @@ typing-extensions==4.12.2 # dioptra (pyproject.toml) # opentelemetry-sdk # sqlalchemy -tzdata==2024.1 +tzdata==2024.2 # via pandas -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # requests -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra (pyproject.toml) # flask @@ -220,5 +234,5 @@ werkzeug==3.0.3 # flask-restx wrapt==1.16.0 # via deprecated -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata diff --git a/docker/requirements/linux-arm64-py3.11-tensorflow2-cpu-requirements.txt b/docker/requirements/linux-arm64-py3.11-tensorflow2-cpu-requirements.txt index 132ab9896..a8bf3e3e7 100644 --- a/docker/requirements/linux-arm64-py3.11-tensorflow2-cpu-requirements.txt +++ b/docker/requirements/linux-arm64-py3.11-tensorflow2-cpu-requirements.txt @@ -9,38 +9,38 @@ absl-py==2.1.0 # keras # tensorboard # tensorflow -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -alembic==1.13.2 +alembic==1.13.3 # via # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene + # via flask-restx astunparse==1.6.3 # via tensorflow async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # jsonschema # referencing blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -cachetools==5.3.3 - # via mlflow -certifi==2024.7.4 +cachetools==5.5.0 + # via + # google-auth + # mlflow-skinny +certifi==2024.8.30 # via requests -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -48,37 +48,39 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect +databricks-sdk==0.36.0 + # via mlflow-skinny deprecated==1.2.14 - # via opentelemetry-api -distributed==2024.6.2 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distributed==2024.10.0 # via prefect docker==7.1.0 # via # mlflow # prefect entrypoints==0.4 - # via - # dioptra (pyproject.toml) - # mlflow + # via dioptra (pyproject.toml) flask==3.0.3 # via # dioptra (pyproject.toml) @@ -88,9 +90,9 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via dioptra (pyproject.toml) flask-login==0.6.3 # via dioptra (pyproject.toml) @@ -106,56 +108,58 @@ flask-sqlalchemy==3.1.1 # flask-migrate flatbuffers==24.3.25 # via tensorflow -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib -fsspec==2024.6.1 +fsspec==2024.10.0 # via dask gast==0.6.0 # via tensorflow gitdb==4.0.11 # via gitpython gitpython==3.1.43 - # via mlflow + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk google-pasta==0.2.0 # via tensorflow -graphene==3.3 +graphene==3.4.1 # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via # tensorboard # tensorflow -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow -h5py==3.11.0 +h5py==3.12.1 # via # keras # tensorflow -idna==3.7 +idna==3.10 # via requests -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect -injector==0.21.0 +injector==0.22.0 # via dioptra (pyproject.toml) itsdangerous==2.2.0 # via flask @@ -170,15 +174,15 @@ jmespath==1.0.1 # botocore joblib==1.4.2 # via scikit-learn -jsonschema==4.22.0 +jsonschema==4.23.0 # via # dioptra (pyproject.toml) # flask-restx -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -keras==3.4.1 +keras==3.6.0 # via tensorflow -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -188,20 +192,20 @@ locket==1.0.0 # via # distributed # partd -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra (pyproject.toml) # flask-accepts @@ -209,12 +213,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools mdurl==0.1.2 # via markdown-it-py @@ -222,9 +225,11 @@ ml-dtypes==0.3.2 # via # keras # tensorflow -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect @@ -234,9 +239,9 @@ mypy-extensions==1.0.0 # via prefect namex==0.0.8 # via keras -networkx==3.3 +networkx==3.4.2 # via scikit-image -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -252,12 +257,9 @@ numpy==1.26.4 # mlflow # nrtk # opencv-python - # opt-einsum # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -273,20 +275,18 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk -opt-einsum==3.3.0 +opt-einsum==3.4.0 # via tensorflow -optree==0.12.0 +optree==0.13.0 # via keras packaging==24.1 # via @@ -297,11 +297,11 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # prefect # scikit-image # tensorflow -pandas==2.2.2 +pandas==2.2.3 # via # dioptra (pyproject.toml) # mlflow @@ -311,7 +311,7 @@ passlib==1.7.4 # via dioptra (pyproject.toml) pendulum==3.0.0 # via prefect -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -322,28 +322,32 @@ pillow==10.4.0 # smqtk-image-io prefect==1.4.1 # via dioptra (pyproject.toml) -protobuf==4.25.3 +protobuf==4.25.5 # via - # mlflow + # mlflow-skinny # tensorboard # tensorflow -psutil==6.0.0 +psutil==6.1.0 # via distributed -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk pygments==2.18.0 # via rich -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra (pyproject.toml) # matplotlib @@ -354,6 +358,7 @@ python-dateutil==2.9.0.post0 # botocore # croniter # dioptra (pyproject.toml) + # graphene # matplotlib # pandas # pendulum @@ -363,25 +368,20 @@ python-json-logger==2.0.7 # via dioptra (pyproject.toml) python-slugify==8.0.4 # via prefect -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # dask # dioptra (pyproject.toml) # distributed - # mlflow + # mlflow-skinny # prefect -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra (pyproject.toml) # rq @@ -391,45 +391,47 @@ referencing==0.35.1 # jsonschema-specifications requests==2.32.3 # via + # databricks-sdk # dioptra (pyproject.toml) # docker - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # tensorflow -rich==13.7.1 +rich==13.9.3 # via # dioptra (pyproject.toml) # keras -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -438,7 +440,6 @@ six==1.16.0 # google-pasta # imgaug # python-dateutil - # querystring-parser # tensorboard # tensorflow smmap==5.0.1 @@ -472,15 +473,15 @@ smqtk-image-io==0.17.1 # smqtk-detection sortedcontainers==2.4.0 # via distributed -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow -structlog==24.2.0 +sqlparse==0.5.1 + # via mlflow-skinny +structlog==24.4.0 # via dioptra (pyproject.toml) tabulate==0.9.0 # via prefect @@ -496,26 +497,26 @@ tensorflow==2.16.1 # via -r requirements-dev-tensorflow.in tensorflow-io-gcs-filesystem==0.37.1 # via tensorflow -termcolor==2.4.0 +termcolor==2.5.0 # via tensorflow text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum toml==0.10.2 # via prefect -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed # partd tornado==6.4.1 # via distributed -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # nrtk @@ -523,22 +524,23 @@ typing-extensions==4.12.2 # via # alembic # dioptra (pyproject.toml) + # graphene # opentelemetry-sdk # optree # sqlalchemy # tensorflow -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed # docker # prefect # requests -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra (pyproject.toml) # flask @@ -546,7 +548,7 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via astunparse wrapt==1.16.0 # via @@ -554,7 +556,7 @@ wrapt==1.16.0 # tensorflow zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/examples/scripts/venvs/examples-setup-requirements.txt b/examples/scripts/venvs/examples-setup-requirements.txt index d641c0f4a..ad71fe5d1 100644 --- a/examples/scripts/venvs/examples-setup-requirements.txt +++ b/examples/scripts/venvs/examples-setup-requirements.txt @@ -1,14 +1,14 @@ -aiohttp>=3.8.0 +aiohttp>=3.8.0,<=3.9.5 Click>=8.0.0,<9 cookiecutter>=2.0.0,<2.2.0 -ipykernel>=6.22.0 -ipython>=8.12.0 +ipykernel>=6.22.0,<=6.29.4 +ipython>=8.12.0,<=8.24.0 jupyter>=1.0.0 -jupyterlab>=3.6.0 -kaggle>=1.5.0 -mlflow-skinny<2 +jupyterlab>=3.6.0,<=4.1.8 +kaggle>=1.5.0,<=1.6.12 +mlflow-skinny>=2,<=2.12.1 numpy>=1.22.0,<2 Pillow>=9.2.0 requests>=2.25,<3 -rich>=13.3.0 -universal_pathlib>=0.0.23 +rich>=13.3.0,<=13.7.1 +universal_pathlib>=0.0.23,<=0.2.5 diff --git a/requirements/linux-amd64-py3.11-requirements-dev-pytorch.txt b/requirements/linux-amd64-py3.11-requirements-dev-pytorch.txt index 79914dc33..9c38a7245 100644 --- a/requirements/linux-amd64-py3.11-requirements-dev-pytorch.txt +++ b/requirements/linux-amd64-py3.11-requirements-dev-pytorch.txt @@ -10,25 +10,25 @@ # via -r requirements-dev.in absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -46,7 +46,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -56,7 +56,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -72,39 +72,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -114,15 +115,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via tox @@ -130,31 +131,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -166,26 +171,25 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # torch # tox # triton # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -197,11 +201,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -223,17 +227,17 @@ flask-sqlalchemy==3.1.1 # dioptra # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # torch @@ -241,35 +245,37 @@ fsspec==2024.6.1 gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow h11==0.14.0 # via httpcore -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -277,18 +283,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -298,14 +304,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -338,7 +343,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -346,17 +351,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -369,12 +373,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -383,21 +386,22 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -407,21 +411,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -430,12 +434,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -447,15 +450,17 @@ mdurl==0.1.2 # via markdown-it-py mistune==3.0.2 # via nbconvert -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) +mlflow-skinny==2.17.1 + # via mlflow mpmath==1.3.0 # via sympy -msgpack==1.0.8 +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -479,17 +484,17 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via # scikit-image # torch -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -505,9 +510,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -544,7 +547,7 @@ nvidia-cusparse-cu12==12.1.0.106 # torch nvidia-nccl-cu12==2.19.3 # via torch -nvidia-nvjitlink-cu12==12.5.82 +nvidia-nvjitlink-cu12==12.6.77 # via # nvidia-cusolver-cu12 # nvidia-cusparse-cu12 @@ -554,16 +557,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk overrides==7.7.0 # via jupyter-server @@ -580,17 +581,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx + # tensorboard # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -609,7 +609,7 @@ pendulum==3.0.0 # via prefect pexpect==4.9.0 # via ipython -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -621,7 +621,7 @@ pillow==10.4.0 # torchvision pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -633,39 +633,45 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) ptyprocess==0.7.0 # via # pexpect # terminado -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -683,23 +689,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -716,6 +721,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -734,16 +740,13 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -751,22 +754,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -779,12 +775,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -796,42 +793,43 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -841,7 +839,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard smmap==5.0.1 @@ -883,46 +880,46 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) -sympy==1.12.1 +sympy==1.13.3 # via torch tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -934,17 +931,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -967,9 +964,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -990,29 +987,30 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole triton==2.2.0 # via torch -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # sqlalchemy # torch -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -1020,11 +1018,11 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -1032,7 +1030,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -1041,19 +1039,19 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via deprecated -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/linux-amd64-py3.11-requirements-dev-tensorflow.txt b/requirements/linux-amd64-py3.11-requirements-dev-tensorflow.txt index 1102a6095..54d6e0650 100644 --- a/requirements/linux-amd64-py3.11-requirements-dev-tensorflow.txt +++ b/requirements/linux-amd64-py3.11-requirements-dev-tensorflow.txt @@ -11,25 +11,25 @@ absl-py==2.1.0 # keras # tensorboard # tensorflow -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -49,7 +49,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -59,7 +59,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -75,39 +75,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -117,15 +118,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via tox @@ -133,31 +134,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -169,24 +174,23 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -198,11 +202,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -226,17 +230,17 @@ flask-sqlalchemy==3.1.1 # flask-migrate flatbuffers==24.3.25 # via tensorflow -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # universal-pathlib @@ -245,43 +249,45 @@ gast==0.6.0 gitdb==4.0.11 # via gitpython gitpython==3.1.43 - # via mlflow + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk google-pasta==0.2.0 # via tensorflow -graphene==3.3 +graphene==3.4.1 # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via # tensorboard # tensorflow -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow h11==0.14.0 # via httpcore -h5py==3.11.0 +h5py==3.12.1 # via # keras # tensorflow -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -289,18 +295,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -310,14 +316,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -349,7 +354,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -357,17 +362,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -380,12 +384,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -394,23 +397,24 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -keras==3.4.1 +keras==3.6.0 # via tensorflow -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -422,21 +426,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -445,12 +449,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -466,13 +469,15 @@ ml-dtypes==0.3.2 # via # keras # tensorflow -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -498,15 +503,15 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via scikit-image -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -523,12 +528,9 @@ numpy==1.26.4 # mlflow # nrtk # opencv-python - # opt-einsum # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -544,20 +546,18 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk -opt-einsum==3.3.0 +opt-einsum==3.4.0 # via tensorflow -optree==0.12.0 +optree==0.13.0 # via keras overrides==7.7.0 # via jupyter-server @@ -575,18 +575,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx # tensorflow # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -605,7 +603,7 @@ pendulum==3.0.0 # via prefect pexpect==4.9.0 # via ipython -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -616,7 +614,7 @@ pillow==10.4.0 # smqtk-image-io pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -628,40 +626,46 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==4.25.5 # via - # mlflow + # mlflow-skinny # tensorboard # tensorflow -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) ptyprocess==0.7.0 # via # pexpect # terminado -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -679,23 +683,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -712,6 +715,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -730,16 +734,13 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -747,22 +748,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -775,12 +769,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -793,44 +788,45 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via # dioptra (pyproject.toml) # keras -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -842,7 +838,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard # tensorflow @@ -885,36 +880,36 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) @@ -932,7 +927,7 @@ tensorflow==2.16.1 # via -r requirements-dev-tensorflow.in tensorflow-io-gcs-filesystem==0.37.1 # via tensorflow -termcolor==2.4.0 +termcolor==2.5.0 # via tensorflow terminado==0.18.1 # via @@ -942,17 +937,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -966,9 +961,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -989,28 +984,29 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # optree # sqlalchemy # tensorflow -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -1018,11 +1014,11 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -1030,7 +1026,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -1039,22 +1035,22 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # astunparse # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via # deprecated # tensorflow -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/linux-amd64-py3.11-requirements-dev.txt b/requirements/linux-amd64-py3.11-requirements-dev.txt index 885fc6d6b..3ebda4e3a 100644 --- a/requirements/linux-amd64-py3.11-requirements-dev.txt +++ b/requirements/linux-amd64-py3.11-requirements-dev.txt @@ -8,25 +8,25 @@ # via -r requirements-dev.in absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -44,7 +44,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -54,7 +54,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -70,39 +70,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -112,15 +113,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via tox @@ -128,31 +129,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -164,24 +169,23 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -193,11 +197,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -219,52 +223,54 @@ flask-sqlalchemy==3.1.1 # dioptra # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # universal-pathlib gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow h11==0.14.0 # via httpcore -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -272,18 +278,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -293,14 +299,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -332,7 +337,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -340,17 +345,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -363,12 +367,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -377,21 +380,22 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -401,21 +405,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -424,12 +428,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -441,13 +444,15 @@ mdurl==0.1.2 # via markdown-it-py mistune==3.0.2 # via nbconvert -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -471,15 +476,15 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via scikit-image -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -495,9 +500,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -512,16 +515,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk overrides==7.7.0 # via jupyter-server @@ -538,17 +539,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx + # tensorboard # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -567,7 +567,7 @@ pendulum==3.0.0 # via prefect pexpect==4.9.0 # via ipython -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -578,7 +578,7 @@ pillow==10.4.0 # smqtk-image-io pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -590,39 +590,45 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) ptyprocess==0.7.0 # via # pexpect # terminado -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -640,23 +646,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -673,6 +678,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -691,16 +697,13 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -708,22 +711,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -736,12 +732,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -753,42 +750,43 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -798,7 +796,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard smmap==5.0.1 @@ -840,36 +837,36 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) @@ -877,7 +874,7 @@ tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -889,17 +886,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -913,9 +910,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -936,26 +933,27 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # sqlalchemy -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -963,11 +961,11 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -975,7 +973,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -984,19 +982,19 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via deprecated -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/linux-arm64-py3.11-requirements-dev-pytorch.txt b/requirements/linux-arm64-py3.11-requirements-dev-pytorch.txt index 7acf963fe..b81cf49e5 100644 --- a/requirements/linux-arm64-py3.11-requirements-dev-pytorch.txt +++ b/requirements/linux-arm64-py3.11-requirements-dev-pytorch.txt @@ -10,25 +10,25 @@ # via -r requirements-dev.in absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -46,7 +46,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -56,7 +56,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -72,39 +72,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -114,15 +115,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via tox @@ -130,31 +131,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -166,25 +171,24 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # torch # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -196,11 +200,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -222,17 +226,17 @@ flask-sqlalchemy==3.1.1 # dioptra # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # torch @@ -240,35 +244,37 @@ fsspec==2024.6.1 gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow h11==0.14.0 # via httpcore -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -276,18 +282,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -297,14 +303,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -337,7 +342,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -345,17 +350,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -368,12 +372,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -382,21 +385,22 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -406,21 +410,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -429,12 +433,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -446,15 +449,17 @@ mdurl==0.1.2 # via markdown-it-py mistune==3.0.2 # via nbconvert -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) +mlflow-skinny==2.17.1 + # via mlflow mpmath==1.3.0 # via sympy -msgpack==1.0.8 +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -478,17 +483,17 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via # scikit-image # torch -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -504,9 +509,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -522,16 +525,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk overrides==7.7.0 # via jupyter-server @@ -548,17 +549,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx + # tensorboard # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -577,7 +577,7 @@ pendulum==3.0.0 # via prefect pexpect==4.9.0 # via ipython -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -589,7 +589,7 @@ pillow==10.4.0 # torchvision pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -601,39 +601,45 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) ptyprocess==0.7.0 # via # pexpect # terminado -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -651,23 +657,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -684,6 +689,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -702,16 +708,13 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -719,22 +722,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -747,12 +743,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -764,42 +761,43 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -809,7 +807,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard smmap==5.0.1 @@ -851,46 +848,46 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) -sympy==1.12.1 +sympy==1.13.3 # via torch tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -902,17 +899,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -935,9 +932,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -958,27 +955,28 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # sqlalchemy # torch -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -986,11 +984,11 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -998,7 +996,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -1007,19 +1005,19 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via deprecated -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/linux-arm64-py3.11-requirements-dev-tensorflow.txt b/requirements/linux-arm64-py3.11-requirements-dev-tensorflow.txt index 0f7629c9f..d54c1295f 100644 --- a/requirements/linux-arm64-py3.11-requirements-dev-tensorflow.txt +++ b/requirements/linux-arm64-py3.11-requirements-dev-tensorflow.txt @@ -11,25 +11,25 @@ absl-py==2.1.0 # keras # tensorboard # tensorflow -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -49,7 +49,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -59,7 +59,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -75,39 +75,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -117,15 +118,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via tox @@ -133,31 +134,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -169,24 +174,23 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -198,11 +202,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -226,17 +230,17 @@ flask-sqlalchemy==3.1.1 # flask-migrate flatbuffers==24.3.25 # via tensorflow -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # universal-pathlib @@ -245,43 +249,45 @@ gast==0.6.0 gitdb==4.0.11 # via gitpython gitpython==3.1.43 - # via mlflow + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk google-pasta==0.2.0 # via tensorflow -graphene==3.3 +graphene==3.4.1 # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via # tensorboard # tensorflow -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow h11==0.14.0 # via httpcore -h5py==3.11.0 +h5py==3.12.1 # via # keras # tensorflow -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -289,18 +295,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -310,14 +316,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -349,7 +354,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -357,17 +362,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -380,12 +384,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -394,23 +397,24 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -keras==3.4.1 +keras==3.6.0 # via tensorflow -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -422,21 +426,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -445,12 +449,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -466,13 +469,15 @@ ml-dtypes==0.3.2 # via # keras # tensorflow -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -498,15 +503,15 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via scikit-image -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -523,12 +528,9 @@ numpy==1.26.4 # mlflow # nrtk # opencv-python - # opt-einsum # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -544,20 +546,18 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk -opt-einsum==3.3.0 +opt-einsum==3.4.0 # via tensorflow -optree==0.12.0 +optree==0.13.0 # via keras overrides==7.7.0 # via jupyter-server @@ -575,18 +575,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx # tensorflow # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -605,7 +603,7 @@ pendulum==3.0.0 # via prefect pexpect==4.9.0 # via ipython -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -616,7 +614,7 @@ pillow==10.4.0 # smqtk-image-io pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -628,40 +626,46 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==4.25.5 # via - # mlflow + # mlflow-skinny # tensorboard # tensorflow -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) ptyprocess==0.7.0 # via # pexpect # terminado -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -679,23 +683,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -712,6 +715,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -730,16 +734,13 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -747,22 +748,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -775,12 +769,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -793,44 +788,45 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via # dioptra (pyproject.toml) # keras -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -842,7 +838,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard # tensorflow @@ -885,36 +880,36 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) @@ -932,7 +927,7 @@ tensorflow==2.16.1 # via -r requirements-dev-tensorflow.in tensorflow-io-gcs-filesystem==0.37.1 # via tensorflow -termcolor==2.4.0 +termcolor==2.5.0 # via tensorflow terminado==0.18.1 # via @@ -942,17 +937,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -966,9 +961,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -989,28 +984,29 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # optree # sqlalchemy # tensorflow -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -1018,11 +1014,11 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -1030,7 +1026,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -1039,22 +1035,22 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # astunparse # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via # deprecated # tensorflow -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/linux-arm64-py3.11-requirements-dev.txt b/requirements/linux-arm64-py3.11-requirements-dev.txt index 916a96416..21f53a9ee 100644 --- a/requirements/linux-arm64-py3.11-requirements-dev.txt +++ b/requirements/linux-arm64-py3.11-requirements-dev.txt @@ -8,25 +8,25 @@ # via -r requirements-dev.in absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -44,7 +44,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -54,7 +54,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -70,39 +70,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -112,15 +113,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via tox @@ -128,31 +129,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -164,24 +169,23 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -193,11 +197,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -219,52 +223,54 @@ flask-sqlalchemy==3.1.1 # dioptra # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # universal-pathlib gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow h11==0.14.0 # via httpcore -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -272,18 +278,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -293,14 +299,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -332,7 +337,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -340,17 +345,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -363,12 +367,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -377,21 +380,22 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -401,21 +405,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -424,12 +428,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -441,13 +444,15 @@ mdurl==0.1.2 # via markdown-it-py mistune==3.0.2 # via nbconvert -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -471,15 +476,15 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via scikit-image -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -495,9 +500,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -512,16 +515,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk overrides==7.7.0 # via jupyter-server @@ -538,17 +539,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx + # tensorboard # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -567,7 +567,7 @@ pendulum==3.0.0 # via prefect pexpect==4.9.0 # via ipython -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -578,7 +578,7 @@ pillow==10.4.0 # smqtk-image-io pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -590,39 +590,45 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) ptyprocess==0.7.0 # via # pexpect # terminado -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -640,23 +646,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -673,6 +678,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -691,16 +697,13 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -708,22 +711,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -736,12 +732,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -753,42 +750,43 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -798,7 +796,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard smmap==5.0.1 @@ -840,36 +837,36 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) @@ -877,7 +874,7 @@ tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -889,17 +886,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -913,9 +910,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -936,26 +933,27 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # sqlalchemy -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -963,11 +961,11 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -975,7 +973,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -984,19 +982,19 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via deprecated -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/macos-amd64-py3.11-requirements-dev-pytorch.txt b/requirements/macos-amd64-py3.11-requirements-dev-pytorch.txt index 98d3e3d9b..9094657ff 100644 --- a/requirements/macos-amd64-py3.11-requirements-dev-pytorch.txt +++ b/requirements/macos-amd64-py3.11-requirements-dev-pytorch.txt @@ -10,25 +10,25 @@ # via -r requirements-dev.in absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -48,7 +48,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -58,7 +58,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -74,39 +74,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -116,15 +117,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via tox @@ -132,31 +133,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -168,25 +173,24 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # torch # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -198,11 +202,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -224,17 +228,17 @@ flask-sqlalchemy==3.1.1 # dioptra # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # torch @@ -242,35 +246,37 @@ fsspec==2024.6.1 gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow h11==0.14.0 # via httpcore -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -278,18 +284,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -299,14 +305,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -339,7 +344,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -347,17 +352,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -370,12 +374,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -384,21 +387,22 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -408,21 +412,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -431,12 +435,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -448,15 +451,17 @@ mdurl==0.1.2 # via markdown-it-py mistune==3.0.2 # via nbconvert -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) +mlflow-skinny==2.17.1 + # via mlflow mpmath==1.3.0 # via sympy -msgpack==1.0.8 +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -480,17 +485,17 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via # scikit-image # torch -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -506,9 +511,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -524,16 +527,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk overrides==7.7.0 # via jupyter-server @@ -550,17 +551,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx + # tensorboard # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -579,7 +579,7 @@ pendulum==3.0.0 # via prefect pexpect==4.9.0 # via ipython -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -591,7 +591,7 @@ pillow==10.4.0 # torchvision pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -603,39 +603,45 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) ptyprocess==0.7.0 # via # pexpect # terminado -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -653,23 +659,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -686,6 +691,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -704,16 +710,13 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -721,22 +724,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -749,12 +745,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -766,42 +763,43 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -811,7 +809,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard smmap==5.0.1 @@ -853,46 +850,46 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) -sympy==1.12.1 +sympy==1.13.3 # via torch tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -904,17 +901,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -937,9 +934,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -960,27 +957,28 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # sqlalchemy # torch -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -988,11 +986,11 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -1000,7 +998,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -1009,19 +1007,19 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via deprecated -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/macos-amd64-py3.11-requirements-dev-tensorflow.txt b/requirements/macos-amd64-py3.11-requirements-dev-tensorflow.txt index 8b85fe511..ef49a6506 100644 --- a/requirements/macos-amd64-py3.11-requirements-dev-tensorflow.txt +++ b/requirements/macos-amd64-py3.11-requirements-dev-tensorflow.txt @@ -11,25 +11,25 @@ absl-py==2.1.0 # keras # tensorboard # tensorflow -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -51,7 +51,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -61,7 +61,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -77,39 +77,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -119,15 +120,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via tox @@ -135,31 +136,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -171,24 +176,23 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -200,11 +204,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -228,17 +232,17 @@ flask-sqlalchemy==3.1.1 # flask-migrate flatbuffers==24.3.25 # via tensorflow -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # universal-pathlib @@ -247,43 +251,45 @@ gast==0.6.0 gitdb==4.0.11 # via gitpython gitpython==3.1.43 - # via mlflow + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk google-pasta==0.2.0 # via tensorflow -graphene==3.3 +graphene==3.4.1 # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via # tensorboard # tensorflow -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow h11==0.14.0 # via httpcore -h5py==3.11.0 +h5py==3.12.1 # via # keras # tensorflow -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -291,18 +297,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -312,14 +318,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -351,7 +356,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -359,17 +364,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -382,12 +386,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -396,23 +399,24 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -keras==3.4.1 +keras==3.6.0 # via tensorflow -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -424,21 +428,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -447,12 +451,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -468,13 +471,15 @@ ml-dtypes==0.3.2 # via # keras # tensorflow -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -500,15 +505,15 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via scikit-image -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -525,12 +530,9 @@ numpy==1.26.4 # mlflow # nrtk # opencv-python - # opt-einsum # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -546,20 +548,18 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk -opt-einsum==3.3.0 +opt-einsum==3.4.0 # via tensorflow -optree==0.12.0 +optree==0.13.0 # via keras overrides==7.7.0 # via jupyter-server @@ -577,18 +577,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx # tensorflow # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -607,7 +605,7 @@ pendulum==3.0.0 # via prefect pexpect==4.9.0 # via ipython -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -618,7 +616,7 @@ pillow==10.4.0 # smqtk-image-io pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -630,40 +628,46 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==4.25.5 # via - # mlflow + # mlflow-skinny # tensorboard # tensorflow -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) ptyprocess==0.7.0 # via # pexpect # terminado -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -681,23 +685,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -714,6 +717,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -732,16 +736,13 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -749,22 +750,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -777,12 +771,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -795,44 +790,45 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via # dioptra (pyproject.toml) # keras -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -844,7 +840,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard # tensorflow @@ -887,36 +882,36 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) @@ -934,7 +929,7 @@ tensorflow==2.16.1 # via -r requirements-dev-tensorflow.in tensorflow-io-gcs-filesystem==0.37.1 # via tensorflow -termcolor==2.4.0 +termcolor==2.5.0 # via tensorflow terminado==0.18.1 # via @@ -944,17 +939,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -968,9 +963,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -991,28 +986,29 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # optree # sqlalchemy # tensorflow -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -1020,11 +1016,11 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -1032,7 +1028,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -1041,22 +1037,22 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # astunparse # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via # deprecated # tensorflow -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/macos-amd64-py3.11-requirements-dev.txt b/requirements/macos-amd64-py3.11-requirements-dev.txt index 301aba06e..c976e4fc2 100644 --- a/requirements/macos-amd64-py3.11-requirements-dev.txt +++ b/requirements/macos-amd64-py3.11-requirements-dev.txt @@ -8,25 +8,25 @@ # via -r requirements-dev.in absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -46,7 +46,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -56,7 +56,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -72,39 +72,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -114,15 +115,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via tox @@ -130,31 +131,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -166,24 +171,23 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -195,11 +199,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -221,52 +225,54 @@ flask-sqlalchemy==3.1.1 # dioptra # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # universal-pathlib gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow h11==0.14.0 # via httpcore -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -274,18 +280,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -295,14 +301,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -334,7 +339,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -342,17 +347,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -365,12 +369,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -379,21 +382,22 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -403,21 +407,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -426,12 +430,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -443,13 +446,15 @@ mdurl==0.1.2 # via markdown-it-py mistune==3.0.2 # via nbconvert -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -473,15 +478,15 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via scikit-image -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -497,9 +502,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -514,16 +517,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk overrides==7.7.0 # via jupyter-server @@ -540,17 +541,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx + # tensorboard # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -569,7 +569,7 @@ pendulum==3.0.0 # via prefect pexpect==4.9.0 # via ipython -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -580,7 +580,7 @@ pillow==10.4.0 # smqtk-image-io pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -592,39 +592,45 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) ptyprocess==0.7.0 # via # pexpect # terminado -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -642,23 +648,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -675,6 +680,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -693,16 +699,13 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -710,22 +713,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -738,12 +734,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -755,42 +752,43 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -800,7 +798,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard smmap==5.0.1 @@ -842,36 +839,36 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) @@ -879,7 +876,7 @@ tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -891,17 +888,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -915,9 +912,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -938,26 +935,27 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # sqlalchemy -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -965,11 +963,11 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -977,7 +975,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -986,19 +984,19 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via deprecated -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/macos-arm64-py3.11-requirements-dev-pytorch.txt b/requirements/macos-arm64-py3.11-requirements-dev-pytorch.txt index b69764ed8..97c32ab11 100644 --- a/requirements/macos-arm64-py3.11-requirements-dev-pytorch.txt +++ b/requirements/macos-arm64-py3.11-requirements-dev-pytorch.txt @@ -10,25 +10,25 @@ # via -r requirements-dev.in absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -48,7 +48,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -58,7 +58,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -74,39 +74,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -116,15 +117,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via tox @@ -132,31 +133,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -168,25 +173,24 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # torch # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -198,11 +202,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -224,17 +228,17 @@ flask-sqlalchemy==3.1.1 # dioptra # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # torch @@ -242,33 +246,35 @@ fsspec==2024.6.1 gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow h11==0.14.0 # via httpcore -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -276,18 +282,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -297,14 +303,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -337,7 +342,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -345,17 +350,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -368,12 +372,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -382,21 +385,22 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -406,21 +410,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -429,12 +433,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -446,15 +449,17 @@ mdurl==0.1.2 # via markdown-it-py mistune==3.0.2 # via nbconvert -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) +mlflow-skinny==2.17.1 + # via mlflow mpmath==1.3.0 # via sympy -msgpack==1.0.8 +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -478,17 +483,17 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via # scikit-image # torch -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -504,9 +509,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -522,16 +525,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk overrides==7.7.0 # via jupyter-server @@ -548,17 +549,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx + # tensorboard # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -577,7 +577,7 @@ pendulum==3.0.0 # via prefect pexpect==4.9.0 # via ipython -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -589,7 +589,7 @@ pillow==10.4.0 # torchvision pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -601,39 +601,45 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) ptyprocess==0.7.0 # via # pexpect # terminado -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -651,23 +657,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -684,6 +689,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -702,16 +708,13 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -719,22 +722,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -747,12 +743,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -764,42 +761,43 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -809,7 +807,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard smmap==5.0.1 @@ -851,46 +848,46 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) -sympy==1.12.1 +sympy==1.13.3 # via torch tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -902,17 +899,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -935,9 +932,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -958,27 +955,28 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # sqlalchemy # torch -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -986,11 +984,11 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -998,7 +996,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -1007,19 +1005,19 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via deprecated -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/macos-arm64-py3.11-requirements-dev-tensorflow.txt b/requirements/macos-arm64-py3.11-requirements-dev-tensorflow.txt index 68a02ee1c..98d182808 100644 --- a/requirements/macos-arm64-py3.11-requirements-dev-tensorflow.txt +++ b/requirements/macos-arm64-py3.11-requirements-dev-tensorflow.txt @@ -11,25 +11,25 @@ absl-py==2.1.0 # keras # tensorboard # tensorflow -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -51,7 +51,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -61,7 +61,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -77,39 +77,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -119,15 +120,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via tox @@ -135,31 +136,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -171,24 +176,23 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -200,11 +204,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -228,17 +232,17 @@ flask-sqlalchemy==3.1.1 # flask-migrate flatbuffers==24.3.25 # via tensorflow -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # universal-pathlib @@ -247,41 +251,43 @@ gast==0.6.0 gitdb==4.0.11 # via gitpython gitpython==3.1.43 - # via mlflow + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk google-pasta==0.2.0 # via tensorflow -graphene==3.3 +graphene==3.4.1 # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -grpcio==1.64.1 +grpcio==1.67.0 # via # tensorboard # tensorflow -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow h11==0.14.0 # via httpcore -h5py==3.11.0 +h5py==3.12.1 # via # keras # tensorflow -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -289,18 +295,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -310,14 +316,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -349,7 +354,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -357,17 +362,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -380,12 +384,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -394,23 +397,24 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -keras==3.4.1 +keras==3.6.0 # via tensorflow -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -422,21 +426,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -445,12 +449,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -466,13 +469,15 @@ ml-dtypes==0.3.2 # via # keras # tensorflow -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -498,15 +503,15 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via scikit-image -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -523,12 +528,9 @@ numpy==1.26.4 # mlflow # nrtk # opencv-python - # opt-einsum # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -544,20 +546,18 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk -opt-einsum==3.3.0 +opt-einsum==3.4.0 # via tensorflow -optree==0.12.0 +optree==0.13.0 # via keras overrides==7.7.0 # via jupyter-server @@ -575,18 +575,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx # tensorflow # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -605,7 +603,7 @@ pendulum==3.0.0 # via prefect pexpect==4.9.0 # via ipython -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -616,7 +614,7 @@ pillow==10.4.0 # smqtk-image-io pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -628,40 +626,46 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==4.25.5 # via - # mlflow + # mlflow-skinny # tensorboard # tensorflow -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) ptyprocess==0.7.0 # via # pexpect # terminado -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -679,23 +683,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -712,6 +715,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -730,16 +734,13 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -747,22 +748,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -775,12 +769,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -793,44 +788,45 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via # dioptra (pyproject.toml) # keras -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -842,7 +838,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard # tensorflow @@ -886,36 +881,36 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) @@ -935,7 +930,7 @@ tensorflow-io-gcs-filesystem==0.37.1 # via tensorflow tensorflow-metal==1.1.0 ; sys_platform == "darwin" and (platform_machine == "aarch64" or platform_machine == "arm64") # via -r requirements-dev-tensorflow.in -termcolor==2.4.0 +termcolor==2.5.0 # via tensorflow terminado==0.18.1 # via @@ -945,17 +940,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -969,9 +964,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -992,28 +987,29 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # optree # sqlalchemy # tensorflow -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -1021,11 +1017,11 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -1033,7 +1029,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -1042,23 +1038,23 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # astunparse # dioptra (pyproject.toml) # pip-tools # tensorflow-metal -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via # deprecated # tensorflow -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/macos-arm64-py3.11-requirements-dev.txt b/requirements/macos-arm64-py3.11-requirements-dev.txt index 2dabbc108..bd7b2752d 100644 --- a/requirements/macos-arm64-py3.11-requirements-dev.txt +++ b/requirements/macos-arm64-py3.11-requirements-dev.txt @@ -8,25 +8,25 @@ # via -r requirements-dev.in absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -46,7 +46,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -56,7 +56,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -72,39 +72,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -114,15 +115,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via tox @@ -130,31 +131,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -166,24 +171,23 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -195,11 +199,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -221,50 +225,52 @@ flask-sqlalchemy==3.1.1 # dioptra # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # universal-pathlib gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard -gunicorn==22.0.0 +gunicorn==23.0.0 # via mlflow h11==0.14.0 # via httpcore -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -272,18 +278,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -293,14 +299,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -332,7 +337,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -340,17 +345,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -363,12 +367,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -377,21 +380,22 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -401,21 +405,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -424,12 +428,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -441,13 +444,15 @@ mdurl==0.1.2 # via markdown-it-py mistune==3.0.2 # via nbconvert -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -471,15 +476,15 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via scikit-image -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -495,9 +500,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -512,16 +515,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk overrides==7.7.0 # via jupyter-server @@ -538,17 +539,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx + # tensorboard # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -567,7 +567,7 @@ pendulum==3.0.0 # via prefect pexpect==4.9.0 # via ipython -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -578,7 +578,7 @@ pillow==10.4.0 # smqtk-image-io pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -590,39 +590,45 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) ptyprocess==0.7.0 # via # pexpect # terminado -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -640,23 +646,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -673,6 +678,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -691,16 +697,13 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -708,22 +711,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -736,12 +732,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -753,42 +750,43 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -798,7 +796,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard smmap==5.0.1 @@ -840,36 +837,36 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) @@ -877,7 +874,7 @@ tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -889,17 +886,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -913,9 +910,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -936,26 +933,27 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # sqlalchemy -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -963,11 +961,11 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -975,7 +973,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -984,19 +982,19 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via deprecated -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/win-amd64-py3.11-requirements-dev-pytorch.txt b/requirements/win-amd64-py3.11-requirements-dev-pytorch.txt index 56c2e6eba..2bb40e05f 100644 --- a/requirements/win-amd64-py3.11-requirements-dev-pytorch.txt +++ b/requirements/win-amd64-py3.11-requirements-dev-pytorch.txt @@ -10,25 +10,25 @@ # via -r requirements-dev.in absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -46,7 +46,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -56,7 +56,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -72,39 +72,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -114,15 +115,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via @@ -137,31 +138,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -173,25 +178,24 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # torch # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -203,11 +207,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -229,17 +233,17 @@ flask-sqlalchemy==3.1.1 # dioptra # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # torch @@ -247,33 +251,35 @@ fsspec==2024.6.1 gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard h11==0.14.0 # via httpcore -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -281,18 +287,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -302,14 +308,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -342,7 +347,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -350,17 +355,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -373,12 +377,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -387,21 +390,22 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -411,21 +415,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -434,12 +438,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -451,15 +454,17 @@ mdurl==0.1.2 # via markdown-it-py mistune==3.0.2 # via nbconvert -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) +mlflow-skinny==2.17.1 + # via mlflow mpmath==1.3.0 # via sympy -msgpack==1.0.8 +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -483,17 +488,17 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via # scikit-image # torch -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -509,9 +514,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -527,16 +530,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk overrides==7.7.0 # via jupyter-server @@ -552,17 +553,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx + # tensorboard # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -579,7 +579,7 @@ passlib==1.7.4 # dioptra (pyproject.toml) pendulum==3.0.0 # via prefect -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -591,7 +591,7 @@ pillow==10.4.0 # torchvision pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -603,35 +603,41 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -649,23 +655,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -682,6 +687,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -700,25 +706,22 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pywin32==306 +pywin32==308 # via # docker # jupyter-core -pywinpty==2.0.13 +pywinpty==2.0.14 # via # jupyter-server # jupyter-server-terminals # terminado -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -726,22 +729,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -754,12 +750,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -771,42 +768,43 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -816,7 +814,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard smmap==5.0.1 @@ -858,46 +855,46 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) -sympy==1.12.1 +sympy==1.13.3 # via torch tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -909,17 +906,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -942,9 +939,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -965,27 +962,28 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # sqlalchemy # torch -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -993,13 +991,13 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox waitress==3.0.0 # via mlflow wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -1007,7 +1005,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -1016,19 +1014,19 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via deprecated -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/win-amd64-py3.11-requirements-dev-tensorflow.txt b/requirements/win-amd64-py3.11-requirements-dev-tensorflow.txt index 2144ed37f..a72a85c6e 100644 --- a/requirements/win-amd64-py3.11-requirements-dev-tensorflow.txt +++ b/requirements/win-amd64-py3.11-requirements-dev-tensorflow.txt @@ -11,25 +11,25 @@ absl-py==2.1.0 # keras # tensorboard # tensorflow-intel -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -49,7 +49,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -59,7 +59,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -75,39 +75,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -117,15 +118,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via @@ -140,31 +141,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -176,24 +181,23 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -205,11 +209,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -233,17 +237,17 @@ flask-sqlalchemy==3.1.1 # flask-migrate flatbuffers==24.3.25 # via tensorflow-intel -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # universal-pathlib @@ -252,41 +256,43 @@ gast==0.6.0 gitdb==4.0.11 # via gitpython gitpython==3.1.43 - # via mlflow + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk google-pasta==0.2.0 # via tensorflow-intel -graphene==3.3 +graphene==3.4.1 # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via # tensorboard # tensorflow-intel h11==0.14.0 # via httpcore -h5py==3.11.0 +h5py==3.12.1 # via # keras # tensorflow-intel -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -294,18 +300,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -315,14 +321,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -354,7 +359,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -362,17 +367,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -385,12 +389,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -399,23 +402,24 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -keras==3.4.1 +keras==3.6.0 # via tensorflow-intel -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -427,21 +431,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -450,12 +454,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -471,13 +474,15 @@ ml-dtypes==0.3.2 # via # keras # tensorflow-intel -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -503,15 +508,15 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via scikit-image -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -528,12 +533,9 @@ numpy==1.26.4 # mlflow # nrtk # opencv-python - # opt-einsum # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -549,20 +551,18 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk -opt-einsum==3.3.0 +opt-einsum==3.4.0 # via tensorflow-intel -optree==0.12.0 +optree==0.13.0 # via keras overrides==7.7.0 # via jupyter-server @@ -579,18 +579,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx # tensorflow-intel # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -607,7 +605,7 @@ passlib==1.7.4 # dioptra (pyproject.toml) pendulum==3.0.0 # via prefect -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -618,7 +616,7 @@ pillow==10.4.0 # smqtk-image-io pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -630,36 +628,42 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==4.25.5 # via - # mlflow + # mlflow-skinny # tensorboard # tensorflow-intel -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -677,23 +681,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -710,6 +713,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -728,25 +732,22 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pywin32==306 +pywin32==308 # via # docker # jupyter-core -pywinpty==2.0.13 +pywinpty==2.0.14 # via # jupyter-server # jupyter-server-terminals # terminado -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -754,22 +755,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -782,12 +776,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -800,44 +795,45 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via # dioptra (pyproject.toml) # keras -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -849,7 +845,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard # tensorflow-intel @@ -892,36 +887,36 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) @@ -941,7 +936,7 @@ tensorflow-intel==2.16.1 # via tensorflow tensorflow-io-gcs-filesystem==0.31.0 # via tensorflow-intel -termcolor==2.4.0 +termcolor==2.5.0 # via tensorflow-intel terminado==0.18.1 # via @@ -951,17 +946,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -975,9 +970,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -998,28 +993,29 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # optree # sqlalchemy # tensorflow-intel -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -1027,13 +1023,13 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox waitress==3.0.0 # via mlflow wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -1041,7 +1037,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -1050,22 +1046,22 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # astunparse # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via # deprecated # tensorflow-intel -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: diff --git a/requirements/win-amd64-py3.11-requirements-dev.txt b/requirements/win-amd64-py3.11-requirements-dev.txt index 3fa923b23..372cad976 100644 --- a/requirements/win-amd64-py3.11-requirements-dev.txt +++ b/requirements/win-amd64-py3.11-requirements-dev.txt @@ -8,25 +8,25 @@ # via -r requirements-dev.in absl-py==2.1.0 # via tensorboard -adversarial-robustness-toolbox==1.18.1 +adversarial-robustness-toolbox==1.18.2 # via dioptra (pyproject.toml) -aiohttp==3.9.5 +aiohappyeyeballs==2.4.3 + # via aiohttp +aiohttp==3.10.10 # via dioptra (pyproject.toml) aiosignal==1.3.1 # via aiohttp alabaster==0.7.16 # via sphinx -alembic==1.13.2 +alembic==1.13.3 # via # dioptra # dioptra (pyproject.toml) # flask-migrate # mlflow aniso8601==9.0.1 - # via - # flask-restx - # graphene -anyio==4.4.0 + # via flask-restx +anyio==4.6.2.post1 # via # httpx # jupyter-server @@ -44,7 +44,7 @@ async-lru==2.0.4 # via jupyterlab async-timeout==4.0.3 # via dioptra (pyproject.toml) -attrs==23.2.0 +attrs==24.2.0 # via # aiohttp # cattrs @@ -54,7 +54,7 @@ attrs==23.2.0 # referencing autopep8==2.3.1 # via dioptra (pyproject.toml) -babel==2.15.0 +babel==2.16.0 # via # jupyterlab-server # sphinx @@ -70,39 +70,40 @@ bleach==6.1.0 # nbconvert blinker==1.8.2 # via flask -boto3==1.34.139 +boto3==1.35.50 # via # dioptra # dioptra (pyproject.toml) -botocore==1.34.139 +botocore==1.35.50 # via # boto3 # s3transfer -build==1.2.1 +build==1.2.2.post1 # via # dioptra (pyproject.toml) # pip-tools -cachetools==5.3.3 +cachetools==5.5.0 # via - # mlflow + # google-auth + # mlflow-skinny # tox -cattrs==23.2.3 +cattrs==24.1.2 # via # lsprotocol # pygls -certifi==2024.7.4 +certifi==2024.8.30 # via # httpcore # httpx # kaggle # requests -cffi==1.16.0 +cffi==1.17.1 # via argon2-cffi-bindings chardet==5.2.0 # via # binaryornot # tox -charset-normalizer==3.3.2 +charset-normalizer==3.4.0 # via requests click==8.1.7 # via @@ -112,15 +113,15 @@ click==8.1.7 # dioptra (pyproject.toml) # distributed # flask - # mlflow + # mlflow-skinny # pip-tools # prefect # rq -cloudpickle==3.0.0 +cloudpickle==3.1.0 # via # dask # distributed - # mlflow + # mlflow-skinny # prefect colorama==0.4.6 # via @@ -135,31 +136,35 @@ comm==0.2.2 # via # ipykernel # ipywidgets -contourpy==1.2.1 +contourpy==1.3.0 # via matplotlib cookiecutter==2.1.1 # via # dioptra (pyproject.toml) # pytest-cookies -croniter==2.0.5 +croniter==4.0.0 # via prefect cycler==0.12.1 # via matplotlib -dask==2024.6.2 +dask==2024.10.0 # via # distributed # prefect -debugpy==1.8.2 +databricks-sdk==0.36.0 + # via mlflow-skinny +debugpy==1.8.7 # via ipykernel decorator==5.1.1 # via ipython defusedxml==0.7.1 # via nbconvert deprecated==1.2.14 - # via opentelemetry-api -distlib==0.3.8 + # via + # opentelemetry-api + # opentelemetry-semantic-conventions +distlib==0.3.9 # via virtualenv -distributed==2024.6.2 +distributed==2024.10.0 # via prefect docker==7.1.0 # via @@ -171,24 +176,23 @@ entrypoints==0.4 # via # dioptra # dioptra (pyproject.toml) - # mlflow -esbonio==0.16.4 +esbonio==0.16.5 # via dioptra (pyproject.toml) -executing==2.0.1 +executing==2.1.0 # via stack-data -faker==26.0.0 +faker==30.8.1 # via dioptra (pyproject.toml) fastjsonschema==2.20.0 # via nbformat -filelock==3.15.4 +filelock==3.16.1 # via # tox # virtualenv -flake8==7.1.0 +flake8==7.1.1 # via # dioptra (pyproject.toml) # flake8-bugbear -flake8-bugbear==24.4.26 +flake8-bugbear==24.8.19 # via dioptra (pyproject.toml) flask==3.0.3 # via @@ -200,11 +204,11 @@ flask==3.0.3 # flask-restx # flask-sqlalchemy # mlflow -flask-accepts==0.18.4 +flask-accepts==1.0.1 # via # dioptra # dioptra (pyproject.toml) -flask-cors==4.0.1 +flask-cors==5.0.0 # via # dioptra # dioptra (pyproject.toml) @@ -226,50 +230,52 @@ flask-sqlalchemy==3.1.1 # dioptra # dioptra (pyproject.toml) # flask-migrate -fonttools==4.53.1 +fonttools==4.54.1 # via matplotlib fqdn==1.5.1 # via jsonschema freezegun==1.5.1 # via dioptra (pyproject.toml) -frozenlist==1.4.1 +frozenlist==1.5.0 # via # aiohttp # aiosignal -fsspec==2024.6.1 +fsspec==2024.10.0 # via # dask # universal-pathlib gitdb==4.0.11 # via gitpython gitpython==3.1.43 + # via mlflow-skinny +google-auth==2.35.0 + # via databricks-sdk +graphene==3.4.1 # via mlflow -graphene==3.3 - # via mlflow -graphql-core==3.2.3 +graphql-core==3.2.5 # via # graphene # graphql-relay graphql-relay==3.2.0 # via graphene -greenlet==3.0.3 +greenlet==3.1.1 # via sqlalchemy -grpcio==1.64.1 +grpcio==1.67.0 # via tensorboard h11==0.14.0 # via httpcore -httpcore==1.0.5 +httpcore==1.0.6 # via httpx -httpx==0.27.0 +httpx==0.27.2 # via jupyterlab -idna==3.7 +idna==3.10 # via # anyio # httpx # jsonschema # requests # yarl -imageio==2.34.2 +imageio==2.36.0 # via # imgaug # scikit-image @@ -277,18 +283,18 @@ imagesize==1.4.1 # via sphinx imgaug==0.4.0 # via dioptra (pyproject.toml) -importlib-metadata==7.1.0 +importlib-metadata==8.4.0 # via # dask - # mlflow + # mlflow-skinny # opentelemetry-api -importlib-resources==6.4.0 +importlib-resources==6.4.5 # via # flask-restx # prefect iniconfig==2.0.0 # via pytest -injector==0.21.0 +injector==0.22.0 # via # dioptra # dioptra (pyproject.toml) @@ -298,14 +304,13 @@ ipykernel==6.29.5 # jupyter # jupyter-console # jupyterlab - # qtconsole -ipython==8.26.0 +ipython==8.29.0 # via # dioptra (pyproject.toml) # ipykernel # ipywidgets # jupyter-console -ipywidgets==8.1.3 +ipywidgets==8.1.5 # via jupyter isoduration==20.11.0 # via jsonschema @@ -337,7 +342,7 @@ json5==0.9.25 # via jupyterlab-server jsonpointer==3.0.0 # via jsonschema -jsonschema[format-nongpl]==4.22.0 +jsonschema[format-nongpl]==4.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -345,17 +350,16 @@ jsonschema[format-nongpl]==4.22.0 # jupyter-events # jupyterlab-server # nbformat -jsonschema-specifications==2023.12.1 +jsonschema-specifications==2024.10.1 # via jsonschema -jupyter==1.0.0 +jupyter==1.1.1 # via dioptra (pyproject.toml) -jupyter-client==8.6.2 +jupyter-client==8.6.3 # via # ipykernel # jupyter-console # jupyter-server # nbclient - # qtconsole jupyter-console==6.6.3 # via jupyter jupyter-core==5.7.2 @@ -368,12 +372,11 @@ jupyter-core==5.7.2 # nbclient # nbconvert # nbformat - # qtconsole jupyter-events==0.10.0 # via jupyter-server jupyter-lsp==2.2.5 # via jupyterlab -jupyter-server==2.14.1 +jupyter-server==2.14.2 # via # jupyter-lsp # jupyterlab @@ -382,21 +385,22 @@ jupyter-server==2.14.1 # notebook-shim jupyter-server-terminals==0.5.3 # via jupyter-server -jupyterlab==4.2.3 +jupyterlab==4.2.5 # via # dioptra (pyproject.toml) + # jupyter # notebook jupyterlab-pygments==0.3.0 # via nbconvert -jupyterlab-server==2.27.2 +jupyterlab-server==2.27.3 # via # jupyterlab # notebook -jupyterlab-widgets==3.0.11 +jupyterlab-widgets==3.0.13 # via ipywidgets -kaggle==1.6.14 +kaggle==1.6.17 # via dioptra (pyproject.toml) -kiwisolver==1.4.5 +kiwisolver==1.4.7 # via matplotlib lazy-loader==0.4 # via scikit-image @@ -406,21 +410,21 @@ locket==1.0.0 # partd lsprotocol==2023.0.1 # via pygls -mako==1.3.5 +mako==1.3.6 # via alembic -markdown==3.6 +markdown==3.7 # via # mlflow # tensorboard markdown-it-py==3.0.0 # via rich -markupsafe==2.1.5 +markupsafe==3.0.2 # via # jinja2 # mako # nbconvert # werkzeug -marshmallow==3.21.3 +marshmallow==3.23.0 # via # dioptra # dioptra (pyproject.toml) @@ -429,12 +433,11 @@ marshmallow==3.21.3 # prefect marshmallow-oneofschema==3.1.1 # via prefect -matplotlib==3.9.1 +matplotlib==3.9.2 # via # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # pycocotools matplotlib-inline==0.1.7 # via @@ -446,13 +449,15 @@ mdurl==0.1.2 # via markdown-it-py mistune==3.0.2 # via nbconvert -mlflow==2.14.2 +mlflow==2.17.1 # via dioptra (pyproject.toml) -msgpack==1.0.8 +mlflow-skinny==2.17.1 + # via mlflow +msgpack==1.1.0 # via # distributed # prefect -multidict==6.0.5 +multidict==6.1.0 # via # aiohttp # yarl @@ -476,15 +481,15 @@ nbformat==5.10.4 # nbconvert nest-asyncio==1.6.0 # via ipykernel -networkx==3.3 +networkx==3.4.2 # via scikit-image -notebook==7.2.1 +notebook==7.2.2 # via jupyter notebook-shim==0.2.4 # via # jupyterlab # notebook -nrtk==0.8.1 +nrtk==0.15.1 # via dioptra (pyproject.toml) numpy==1.26.4 # via @@ -500,9 +505,7 @@ numpy==1.26.4 # opencv-python # pandas # pyarrow - # pybsm # pycocotools - # pywavelets # scikit-image # scikit-learn # scipy @@ -517,16 +520,14 @@ opencv-python==4.10.0.84 # via # dioptra (pyproject.toml) # imgaug - # nrtk - # pybsm -opentelemetry-api==1.25.0 +opentelemetry-api==1.27.0 # via - # mlflow + # mlflow-skinny # opentelemetry-sdk # opentelemetry-semantic-conventions -opentelemetry-sdk==1.25.0 - # via mlflow -opentelemetry-semantic-conventions==0.46b0 +opentelemetry-sdk==1.27.0 + # via mlflow-skinny +opentelemetry-semantic-conventions==0.48b0 # via opentelemetry-sdk overrides==7.7.0 # via jupyter-server @@ -542,17 +543,16 @@ packaging==24.1 # lazy-loader # marshmallow # matplotlib - # mlflow + # mlflow-skinny # nbconvert # prefect # pyproject-api # pytest - # qtconsole - # qtpy # scikit-image # sphinx + # tensorboard # tox -pandas==2.2.2 +pandas==2.2.3 # via # dioptra # dioptra (pyproject.toml) @@ -569,7 +569,7 @@ passlib==1.7.4 # dioptra (pyproject.toml) pendulum==3.0.0 # via prefect -pillow==10.4.0 +pillow==11.0.0 # via # dioptra (pyproject.toml) # imageio @@ -580,7 +580,7 @@ pillow==10.4.0 # smqtk-image-io pip-tools==7.4.1 # via dioptra (pyproject.toml) -platformdirs==4.2.2 +platformdirs==4.3.6 # via # esbonio # jupyter-core @@ -592,35 +592,41 @@ pluggy==1.5.0 # tox prefect==1.4.1 # via dioptra (pyproject.toml) -prometheus-client==0.20.0 +prometheus-client==0.21.0 # via jupyter-server -prompt-toolkit==3.0.47 +prompt-toolkit==3.0.48 # via # ipython # jupyter-console -protobuf==4.25.3 +propcache==0.2.0 + # via yarl +protobuf==5.28.3 # via - # mlflow + # mlflow-skinny # tensorboard -psutil==6.0.0 +psutil==6.1.0 # via # distributed # ipykernel -psycopg2-binary==2.9.9 +psycopg2-binary==2.9.10 # via dioptra (pyproject.toml) -pure-eval==0.2.2 +pure-eval==0.2.3 # via stack-data -pyarrow==15.0.2 +pyarrow==17.0.0 # via # dioptra (pyproject.toml) # mlflow -pybsm==0.5.1 - # via nrtk +pyasn1==0.6.1 + # via + # pyasn1-modules + # rsa +pyasn1-modules==0.4.1 + # via google-auth pycocotools==2.0.8 # via # dioptra (pyproject.toml) # nrtk -pycodestyle==2.12.0 +pycodestyle==2.12.1 # via # autopep8 # dioptra (pyproject.toml) @@ -638,23 +644,22 @@ pygments==2.18.0 # ipython # jupyter-console # nbconvert - # qtconsole # rich # sphinx -pyparsing==3.1.2 +pyparsing==3.2.0 # via # dioptra # dioptra (pyproject.toml) # matplotlib -pyproject-api==1.7.1 +pyproject-api==1.8.0 # via tox -pyproject-hooks==1.1.0 +pyproject-hooks==1.2.0 # via # build # pip-tools pyspellchecker==0.8.1 # via esbonio -pytest==8.2.2 +pytest==8.3.3 # via # dioptra (pyproject.toml) # pytest-cookies @@ -671,6 +676,7 @@ python-dateutil==2.9.0.post0 # dioptra (pyproject.toml) # faker # freezegun + # graphene # jupyter-client # kaggle # matplotlib @@ -689,25 +695,22 @@ python-slugify==8.0.4 # prefect pytoml==0.1.21 # via dioptra (pyproject.toml) -pytz==2024.1 +pytz==2024.2 # via # croniter # flask-restx - # mlflow # pandas # prefect -pywavelets==1.6.0 - # via scikit-image -pywin32==306 +pywin32==308 # via # docker # jupyter-core -pywinpty==2.0.13 +pywinpty==2.0.14 # via # jupyter-server # jupyter-server-terminals # terminado -pyyaml==6.0.1 +pyyaml==6.0.2 # via # cookiecutter # dask @@ -715,22 +718,15 @@ pyyaml==6.0.1 # dioptra (pyproject.toml) # distributed # jupyter-events - # mlflow + # mlflow-skinny # prefect -pyzmq==26.0.3 +pyzmq==26.2.0 # via # ipykernel # jupyter-client # jupyter-console # jupyter-server - # qtconsole -qtconsole==5.5.2 - # via jupyter -qtpy==2.4.1 - # via qtconsole -querystring-parser==1.2.4 - # via mlflow -redis==5.0.7 +redis==5.2.0 # via # dioptra # dioptra (pyproject.toml) @@ -743,12 +739,13 @@ referencing==0.35.1 requests==2.32.3 # via # cookiecutter + # databricks-sdk # dioptra # dioptra (pyproject.toml) # docker # jupyterlab-server # kaggle - # mlflow + # mlflow-skinny # prefect # smqtk-dataprovider # sphinx @@ -760,42 +757,43 @@ rfc3986-validator==0.1.1 # via # jsonschema # jupyter-events -rich==13.7.1 +rich==13.9.3 # via dioptra (pyproject.toml) -rpds-py==0.18.1 +rpds-py==0.20.0 # via # jsonschema # referencing -rq==1.16.2 +rq==2.0.0 # via # dioptra # dioptra (pyproject.toml) -s3transfer==0.10.2 +rsa==4.9 + # via google-auth +s3transfer==0.10.3 # via boto3 -scikit-image==0.21.0 +scikit-image==0.24.0 # via # imgaug # nrtk -scikit-learn==1.5.1 +scikit-learn==1.5.2 # via # adversarial-robustness-toolbox # dioptra (pyproject.toml) # mlflow -scipy==1.13.1 +scipy==1.14.1 # via # adversarial-robustness-toolbox # dioptra # dioptra (pyproject.toml) # imgaug # mlflow - # pybsm # scikit-image # scikit-learn send2trash==1.8.3 # via jupyter-server -shapely==2.0.4 +shapely==2.0.6 # via imgaug -simplejson==3.19.2 +simplejson==3.19.3 # via dioptra (pyproject.toml) six==1.16.0 # via @@ -805,7 +803,6 @@ six==1.16.0 # imgaug # kaggle # python-dateutil - # querystring-parser # rfc3339-validator # tensorboard smmap==5.0.1 @@ -847,36 +844,36 @@ snowballstemmer==2.2.0 # sphinx sortedcontainers==2.4.0 # via distributed -soupsieve==2.5 +soupsieve==2.6 # via beautifulsoup4 sphinx==4.5.0 # via # dioptra (pyproject.toml) # esbonio -sphinxcontrib-applehelp==1.0.8 +sphinxcontrib-applehelp==2.0.0 # via sphinx -sphinxcontrib-devhelp==1.0.6 +sphinxcontrib-devhelp==2.0.0 # via sphinx -sphinxcontrib-htmlhelp==2.0.5 +sphinxcontrib-htmlhelp==2.1.0 # via sphinx sphinxcontrib-jsmath==1.0.1 # via sphinx -sphinxcontrib-qthelp==1.0.7 +sphinxcontrib-qthelp==2.0.0 # via sphinx -sphinxcontrib-serializinghtml==1.1.10 +sphinxcontrib-serializinghtml==2.0.0 # via sphinx -sqlalchemy==2.0.31 +sqlalchemy==2.0.36 # via # alembic # dioptra # dioptra (pyproject.toml) # flask-sqlalchemy # mlflow -sqlparse==0.5.0 - # via mlflow +sqlparse==0.5.1 + # via mlflow-skinny stack-data==0.6.3 # via ipython -structlog==24.2.0 +structlog==24.4.0 # via # dioptra # dioptra (pyproject.toml) @@ -884,7 +881,7 @@ tabulate==0.9.0 # via prefect tblib==3.0.0 # via distributed -tensorboard==2.17.0 +tensorboard==2.18.0 # via dioptra (pyproject.toml) tensorboard-data-server==0.7.2 # via tensorboard @@ -896,17 +893,17 @@ text-unidecode==1.3 # via python-slugify threadpoolctl==3.5.0 # via scikit-learn -tifffile==2024.7.2 +tifffile==2024.9.20 # via scikit-image -time-machine==2.14.2 +time-machine==2.16.0 # via pendulum -tinycss2==1.3.0 +tinycss2==1.4.0 # via nbconvert toml==0.10.2 # via prefect -tomli==2.0.1 +tomli==2.0.2 # via dioptra (pyproject.toml) -toolz==0.12.1 +toolz==1.0.0 # via # dask # distributed @@ -920,9 +917,9 @@ tornado==6.4.1 # jupyterlab # notebook # terminado -tox==4.16.0 +tox==4.23.2 # via dioptra (pyproject.toml) -tqdm==4.66.4 +tqdm==4.66.6 # via # adversarial-robustness-toolbox # kaggle @@ -943,26 +940,27 @@ traitlets==5.14.3 # nbclient # nbconvert # nbformat - # qtconsole -types-python-dateutil==2.9.0.20240316 +types-python-dateutil==2.9.0.20241003 # via arrow typing-extensions==4.12.2 # via # alembic # dioptra # dioptra (pyproject.toml) + # faker + # graphene # ipython # opentelemetry-sdk # sqlalchemy -tzdata==2024.1 +tzdata==2024.2 # via # pandas # pendulum -universal-pathlib==0.2.2 +universal-pathlib==0.2.5 # via dioptra (pyproject.toml) uri-template==1.3.0 # via jsonschema -urllib3==2.2.2 +urllib3==2.2.3 # via # botocore # distributed @@ -970,13 +968,13 @@ urllib3==2.2.2 # kaggle # prefect # requests -virtualenv==20.26.3 +virtualenv==20.27.1 # via tox waitress==3.0.0 # via mlflow wcwidth==0.2.13 # via prompt-toolkit -webcolors==24.6.0 +webcolors==24.8.0 # via jsonschema webencodings==0.5.1 # via @@ -984,7 +982,7 @@ webencodings==0.5.1 # tinycss2 websocket-client==1.8.0 # via jupyter-server -werkzeug==3.0.3 +werkzeug==3.0.6 # via # dioptra # dioptra (pyproject.toml) @@ -993,19 +991,19 @@ werkzeug==3.0.3 # flask-login # flask-restx # tensorboard -wheel==0.43.0 +wheel==0.44.0 # via # dioptra (pyproject.toml) # pip-tools -widgetsnbextension==4.0.11 +widgetsnbextension==4.0.13 # via ipywidgets wrapt==1.16.0 # via deprecated -yarl==1.9.4 +yarl==1.16.0 # via aiohttp zict==3.0.0 # via distributed -zipp==3.19.2 +zipp==3.20.2 # via importlib-metadata # The following packages are considered to be unsafe in a requirements file: