_config.yml

# Book settings
# Learn more at https://jupyterbook.org/customize/config.html

title: Reproducibility Principles and Practices
author: Nick Ulle
copyright: "2023"
logo: img/datalab-logo-full-color-rgb-1.png
exclude_patterns: [_build, .pixi]
only_build_toc_files: true

repository:
  url: https://github.com/ucdavisdatalab/workshop_reproducible_research

parse:
  myst_enable_extensions:
    # - amsmath
    - colon_fence
    # - deflist
    - dollarmath
    # - html_admonition
    - html_image
    - linkify
    # - replacements
    # - smartquotes
    - substitution

execute:
  execute_notebooks: auto

html:
  use_issues_button: true
  use_repository_button: true
  # JupyterBook defaults to a copyright in the footer. We take this out and use
  # a custom license badge instead.
  extra_footer: |
    <a href="https://creativecommons.org/licenses/by-nc-sa/4.0/" target="_blank">
      <img alt="CC BY-SA 4.0" src="https://img.shields.io/badge/License-CC%20BY--NC--SA%204.0-lightgrey.svg">
    </a>

sphinx:
  config:
    language: en-us
    # Hide copyright.
    html_show_copyright: false

# Define the name of the latex output file for PDF builds
#latex:
#  latex_documents:
#    targetname: book.tex

# If desired, add a bibtex file so that we can create citations
#bibtex_bibfiles:
#  - references.bib