DESCRIPTION

Package: Siccuracy
Type: Package
Title: Pipeline Package for AlphaImpute
Version: 0.8.0
Date: 2017-09-11
Authors@R: person(given=c("Stefan","McKinnon"), family="Edwards", role = c("aut", "cre"),
		     email = "sme@iysik.com")
Description: Resources for manipulating genotype files in AlphaImpute format,
    calculating imputation accuracies (both correlations and correctly imputed)
    across both samples and SNPs, and calculating heterozygosities.
    Also features converting PLINK files, reading SHAPEIT and Oxford formatted
    files, and calculating imputation accuracies on these.
License: GPL-2 | GPL-3
LazyData: TRUE
URL: https://github.com/stefanedwards/Siccuracy
Depends:
    R (> 3.1.0)
Imports:
    vcfR (>= 1.4.0),
    abind (>= 1.4.5)
Suggests:
    testthat,
    knitr,
    rmarkdown
RoxygenNote: 6.0.1
BugReports: https://github.com/stefanedwards/Siccuracy/issues