From e0aa0131d77ce3c5d1c973c54ad5fef80e1c642f Mon Sep 17 00:00:00 2001 From: jqujqu Date: Wed, 1 Mar 2017 12:39:26 -0800 Subject: [PATCH] Remove hmr_posterior program --- src/analysis/Makefile | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/src/analysis/Makefile b/src/analysis/Makefile index aec2541..80beb8b 100644 --- a/src/analysis/Makefile +++ b/src/analysis/Makefile @@ -25,7 +25,7 @@ endif PROGS = pmd methcounts bsrate hmr hypermr \ levels roimethstat \ - methstates methentropy hmr_posterior hmr_rep + methstates methentropy hmr_rep CXX = g++ CXXFLAGS = -Wall -fmessage-length=50 -std=c++11 @@ -41,7 +41,7 @@ CXXFLAGS += $(OPTFLAGS) endif COMMON_DIR = ../common -INCLUDEDIRS = $(SMITHLAB_CPP) $(COMMON_DIR) +INCLUDEDIRS = $(SMITHLAB_CPP) $(COMMON_DIR) INCLUDEARGS = $(addprefix -I,$(INCLUDEDIRS)) @@ -62,7 +62,7 @@ bsrate methcounts: $(addprefix $(SMITHLAB_CPP)/, \ bsrate methcounts: $(addprefix $(SMITHLAB_CPP)/, QualityScore.o) -hmr pmd hmr_posterior hmr_rep: $(addprefix $(COMMON_DIR)/, TwoStateHMM.o) +hmr pmd hmr_rep: $(addprefix $(COMMON_DIR)/, TwoStateHMM.o) hypermr: $(addprefix $(COMMON_DIR)/, ThreeStateHMM.o Smoothing.o \ Distro.o BetaBin.o numerical_utils.o)