From f4c16e123e04bf34d5aceb972b9ca5bab11ff94d Mon Sep 17 00:00:00 2001
From: Behnam Robatmili <brobatmili@chanzuckerberg.com>
Date: Mon, 8 Jan 2024 16:32:26 -0800
Subject: [PATCH] Reseting somacore version to the latest

---
 .github/workflows/r-python-interop-testing.yml | 3 ---
 apis/python/setup.py                           | 4 ----
 apis/python/src/tiledbsoma/_experiment.py      | 1 -
 libtiledbsoma/src/reindexer/example.py         | 3 ++-
 4 files changed, 2 insertions(+), 9 deletions(-)

diff --git a/.github/workflows/r-python-interop-testing.yml b/.github/workflows/r-python-interop-testing.yml
index 434f219495..c58aacfeda 100644
--- a/.github/workflows/r-python-interop-testing.yml
+++ b/.github/workflows/r-python-interop-testing.yml
@@ -59,9 +59,6 @@ jobs:
           FILE=$(ls -1t *.tar.gz | head -n 1)
           R CMD INSTALL $FILE
 
-      - name: Install tiledb
-        run: Rscript -e 'remotes::install_version("tiledb", "0.22.0")'
-
       - name: Show R package versions
         run: Rscript -e 'tiledbsoma::show_package_versions()'
 
diff --git a/apis/python/setup.py b/apis/python/setup.py
index 968f26ae81..78f475870e 100644
--- a/apis/python/setup.py
+++ b/apis/python/setup.py
@@ -40,7 +40,6 @@
 
 import version  # noqa E402
 
-
 # tiledb_dir and libtiledbsoma_dir may be specified by either environment variable
 # or command-line argument. If both are provided, the latter wins.
 
@@ -296,9 +295,6 @@ def run(self):
         "scipy",
         "somacore==1.0.7",
         "tiledb~=0.25.0",
-        # "somacore==1.0.4", # temporarily change for this PR! TODO will be reversed before landing
-        "somacore @ git+https://github.com/single-cell-data/SOMA.git@b47bbc87f6fa37aed6a7b30c3ac0ddca4bc9fc6c",
-        "tiledb~=0.24.0",
         "typing-extensions",  # Note "-" even though `import typing_extensions`
     ],
     extras_require={
diff --git a/apis/python/src/tiledbsoma/_experiment.py b/apis/python/src/tiledbsoma/_experiment.py
index 4b15bc86a2..c2b3c94936 100644
--- a/apis/python/src/tiledbsoma/_experiment.py
+++ b/apis/python/src/tiledbsoma/_experiment.py
@@ -76,7 +76,6 @@ def _set_create_metadata(cls, handle: Wrapper[Any]) -> None:
         handle.metadata["dataset_type"] = "soma"
         return super()._set_create_metadata(handle)
 
-    # in tiledbsoma
     def axis_query(  # type: ignore
         self,
         measurement_name: str,
diff --git a/libtiledbsoma/src/reindexer/example.py b/libtiledbsoma/src/reindexer/example.py
index b07f020cb9..1bf6ca5b9f 100644
--- a/libtiledbsoma/src/reindexer/example.py
+++ b/libtiledbsoma/src/reindexer/example.py
@@ -18,4 +18,5 @@ def main():
     print(f"End to end time {t2 - t1}")
 
 
-main()
+if __name__ == "__main__":
+    main()