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cofactors.json
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{
"HEM": "Atoms('Fe').Inside(Residues('HEM'))",
"HEC": "Atoms('Fe').Inside(Residues('HEC'))",
"HEA": "Atoms('Fe').Inside(Residues('HEA'))",
"FAD": "AtomNames('N5').Inside(Residues('FAD'))",
"FMN": "AtomNames('N5').Inside(Residues('FMN'))",
"NAD": "AtomNames('N1N').Inside(Residues('NAD'))",
"NAP": "AtomNames('N1N').Inside(Residues('NAP'))",
"NDP": "AtomNames('N1N').Inside(Residues('NDP'))",
"NAI": "AtomNames('N1N').Inside(Residues('NAI'))",
"ATP": "AtomNames('PA').Inside(Residues('ATP'))",
"CTP": "AtomNames('PA').Inside(Residues('CTP'))",
"UTP": "AtomNames('PA').Inside(Residues('UTP'))",
"GTP": "AtomNames('PA').Inside(Residues('GTP'))",
"TTP": "AtomNames('PA').Inside(Residues('TTP'))",
"ADP": "AtomNames('PA').Inside(Residues('ADP'))",
"CDP": "AtomNames('PA').Inside(Residues('CDP'))",
"UDP": "AtomNames('PA').Inside(Residues('UDP'))",
"GDP": "AtomNames('PA').Inside(Residues('GDP'))",
"TDP": "AtomNames('PA').Inside(Residues('TDP'))",
"AMP": "AtomNames('PA').Inside(Residues('AMP'))",
"CMP": "AtomNames('PA').Inside(Residues('CMP'))",
"ANP": "AtomNames('PA').Inside(Residues('ANP'))",
"RBF": "AtomNames('N5').Inside(Residues('RBF'))",
"PLP": "AtomNames('C4A').Inside(Residues('PLP'))",
"B12": "AtomNames('CO').Inside(Residues('B12'))",
"BTN": "AtomNames('C3').Inside(Residues('BTN'))",
"COA": "AtomNames('S1P').Inside(Residues('COA'))",
"ACO": "AtomNames('S1P').Inside(Residues('ACO'))",
"GSH": "AtomNames('SG2').Inside(Residues('GSH'))",
"GDS": "AtomNames('SG2').Inside(Residues('GDS'))"
}