From 840f4d9d1650b434a9035a3b9874c16b8d3a59f1 Mon Sep 17 00:00:00 2001 From: PauBadiaM Date: Fri, 21 Apr 2023 18:52:30 +0200 Subject: [PATCH] Updated decoupleR install --- .github/workflows/check-bioc.yml | 1 + 1 file changed, 1 insertion(+) diff --git a/.github/workflows/check-bioc.yml b/.github/workflows/check-bioc.yml index 4651332..f442d47 100644 --- a/.github/workflows/check-bioc.yml +++ b/.github/workflows/check-bioc.yml @@ -166,6 +166,7 @@ jobs: ## Pass #1 at installing dependencies message(paste('****', Sys.time(), 'pass number 1 at installing dependencies: local dependencies ****')) remotes::install_github('saezlab/OmnipathR@master', upgrade = FALSE) + remotes::install_github('saezlab/decoupleR@master', upgrade = FALSE) remotes::install_local(dependencies = TRUE, repos = BiocManager::repositories(), build_vignettes = TRUE, upgrade = TRUE) continue-on-error: true shell: Rscript {0}