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I was trying to launch in R with SpectraQL the function below (found in https://msql.ucsd.edu/compendium/) QUERY scaninfo(MS2DATA) WHERE MS2PREC=X AND MS1MZ=X AND MS1MZ=X+formula(Na)-formula(H)
I tried but failed because X is non numeric (I think)
<mh<- query(dda,"QUERY scaninfo(MS2DATA) WHERE MS2PREC=X AND MS1MZ=X AND MS1MZ=X+formula(Na)-formula(H)")
Error in .translate_condition_ms2prec(MS2PREC = c(MS2PREC = "X")) :
Missing or non-numeric value(s) for 'MS2PREC'
In addition: Warning message:
In .translate_condition_ms2prec(MS2PREC = c(MS2PREC = "X")) :
NAs introduced by coercion>
I know that not all massQL functions are already in SpectraQL, but would be super cool to be able to search for generic patterns
with X
Best
Yann
The text was updated successfully, but these errors were encountered:
Hm, good point. yes, and we did not (yet) implement things like formula(Na) - formula(H) - still lots of things to do I'm afraid - but thanks for pointing it out!
Hi @jorainer
I was trying to launch in R with SpectraQL the function below (found in https://msql.ucsd.edu/compendium/)
QUERY scaninfo(MS2DATA) WHERE MS2PREC=X AND MS1MZ=X AND MS1MZ=X+formula(Na)-formula(H)
I tried but failed because X is non numeric (I think)
<mh<- query(dda,"QUERY scaninfo(MS2DATA) WHERE MS2PREC=X AND MS1MZ=X AND MS1MZ=X+formula(Na)-formula(H)")
Error in .translate_condition_ms2prec(MS2PREC = c(MS2PREC = "X")) :
Missing or non-numeric value(s) for 'MS2PREC'
In addition: Warning message:
In .translate_condition_ms2prec(MS2PREC = c(MS2PREC = "X")) :
NAs introduced by coercion>
I know that not all massQL functions are already in SpectraQL, but would be super cool to be able to search for generic patterns
with X
Best
Yann
The text was updated successfully, but these errors were encountered: