pkgcheck results - main

[github-actions]

Checks for CatastRo (v0.3.0)

git hash: 251e6657

• ✔️ Package is already on CRAN.
• ✔️ has a 'codemeta.json' file.
• ✔️ has a 'contributing' file.
• ✔️ uses 'roxygen2'.
• ✔️ 'DESCRIPTION' has a URL field.
• ✔️ 'DESCRIPTION' has a BugReports field.
• ✔️ Package has at least one HTML vignette
• ✔️ All functions have examples.
• ✔️ Package has continuous integration checks.
• ✖️ Package coverage is 54.4% (should be at least 75%).
• ✔️ R CMD check found no errors.
• ✔️ R CMD check found no warnings.

Important: All failing checks above must be addressed prior to proceeding

Package License: GPL-2

---

1. Package Dependencies

Details of Package Dependency Usage (click to open)

The table below tallies all function calls to all packages ('ncalls'), both internal (r-base + recommended, along with the package itself), and external (imported and suggested packages). 'NA' values indicate packages to which no identified calls to R functions could be found. Note that these results are generated by an automated code-tagging system which may not be entirely accurate.

type	package	ncalls
internal	base	187
internal	CatastRo	84
internal	utils	7
internal	stats	5
internal	graphics	3
imports	tibble	21
imports	httr	11
imports	sf	11
imports	xml2	9
imports	dplyr	6
imports	mapSpain	2
imports	rappdirs	2
imports	stringi	NA
imports	terra	NA
suggests	ggplot2	NA
suggests	knitr	NA
suggests	png	NA
suggests	rmarkdown	NA
suggests	slippymath	NA
suggests	testthat	NA
suggests	tidyterra	NA
linking_to	NA	NA

Click below for tallies of functions used in each package. Locations of each call within this package may be generated locally by running 's <- pkgstats::pkgstats(<path/to/repo>)', and examining the 'external_calls' table.

base

unlist (21), paste0 (19), all (13), basename (12), list (12), grep (11), url (10), lapply (7), c (6), file.path (6), gsub (5), strsplit (5), as.double (4), character (4), names (4), switch (4), vapply (4), as.character (3), list.files (3), q (3), readLines (3), tempfile (3), try (3), unique (3), as.integer (2), as.POSIXct (2), attr (2), date (2), sprintf (2), tempdir (2), as.vector (1), file.exists (1), file.size (1), options (1), seq (1), Sys.getenv (1), version (1)

CatastRo

catr_hlp_dwnload (13), wfs_api_query (11), wfs_results (11), catr_read_atom (6), st_read_layers_encoding (5), catr_atom_get_address_db_all (4), catr_atom_get_buildings_db_all (3), catr_atom_get_parcels_db_all (3), catr_hlp_detect_cache_dir (3), wfs_bbox (3), catr_atom_get_address_db_to (2), catr_atom_get_buildings_db_to (2), catr_atom_get_parcels_db_to (2), catr_ovc_get_cod_munic (2), get_sf_from_bbox (2), catr_atom_get_address (1), catr_atom_get_buildings (1), catr_atom_get_parcels (1), catr_atom_search_munic (1), catr_clear_cache (1), catr_detect_cache_dir (1), catr_get_code_from_coords (1), catr_hlp_cachedir (1), catr_hlp_dwn_verbose (1), catr_set_cache_dir (1), catr_wfs_check (1), catr_wfs_get_buildingsild_url (1)

tibble

tibble (11), as_tibble_row (6), deframe (4)

httr

content (3), GET (3), parse_url (3), modify_url (2)

sf

st_bbox (2), st_intersects (2), st_layers (2), st_area (1), st_centroid (1), st_point (1), st_sfc (1), st_transform (1)

xml2

as_list (6), read_xml (3)

utils

unzip (3), download.file (2), modifyList (2)

dplyr

bind_cols (4), bind_rows (1), left_join (1)

stats

df (5)

graphics

title (2), lines (1)

mapSpain

esp_get_munic_siane (1), esp_getTiles (1)

rappdirs

user_config_dir (2)

NOTE: Some imported packages appear to have no associated function calls; please ensure with author that these 'Imports' are listed appropriately.

---

2. Statistical Properties

This package features some noteworthy statistical properties which may need to be clarified by a handling editor prior to progressing.

Details of statistical properties (click to open)

The package has:

• code in R (100% in 25 files) and
• 2 authors
• 2 vignettes
• 1 internal data file
• 9 imported packages
• 31 exported functions (median 18 lines of code)
• 59 non-exported functions in R (median 26 lines of code)

---

Statistical properties of package structure as distributional percentiles in relation to all current CRAN packages
The following terminology is used:

• loc = "Lines of Code"
• fn = "function"
• exp/not_exp = exported / not exported

All parameters are explained as tooltips in the locally-rendered HTML version of this report generated by the checks_to_markdown() function

The final measure (fn_call_network_size) is the total number of calls between functions (in R), or more abstract relationships between code objects in other languages. Values are flagged as "noteworthy" when they lie in the upper or lower 5th percentile.

measure	value	percentile	noteworthy
files_R	25	86.3
files_vignettes	2	85.7
files_tests	19	96.0
loc_R	1394	76.5
loc_vignettes	298	63.2
loc_tests	752	82.5
num_vignettes	2	89.2
data_size_total	390	58.0
data_size_median	390	58.9
n_fns_r	90	73.7
n_fns_r_exported	31	79.2
n_fns_r_not_exported	59	72.0
n_fns_per_file_r	2	34.6
num_params_per_fn	4	54.6
loc_per_fn_r	23	66.0
loc_per_fn_r_exp	18	42.5
loc_per_fn_r_not_exp	26	73.5
rel_whitespace_R	30	86.0
rel_whitespace_vignettes	44	73.4
rel_whitespace_tests	29	86.3
doclines_per_fn_exp	78	83.8
doclines_per_fn_not_exp	0	0.0	TRUE
fn_call_network_size	85	76.4

---

2a. Network visualisation

An interactive visualisation of calls between objects in the package has been uploaded as a workflow artefact. To view it, click on results from the latest 'pkgcheck' action, scroll to the bottom, and click on the 'visual-network' artefact.

---

3. goodpractice and other checks

Details of goodpractice checks (click to open)

3a. Continuous Integration Badges

GitHub Workflow Results

id	name	conclusion	sha	run_number	date
7562916141	Clear GHA caches manually	success	6427d3	4	2024-01-17
7570586915	lintr	success	251e66	34	2024-01-18
7570667415	pages build and deployment with artifacts-next	success	104bf4	106	2024-01-18
7571081215	pkgcheck	NA	251e66	3	2024-01-18
7570586895	R-CMD-check	success	251e66	311	2024-01-18
7570586909	rostemplate-gh-pages	success	251e66	70	2024-01-18
7570586899	test-coverage	success	251e66	122	2024-01-18
7555278251	update-docs	success	37f07f	35	2024-01-17

---

3b. goodpractice results

R CMD check with rcmdcheck

R CMD check generated the following note:

1. checking data for non-ASCII characters ... NOTE
   Note: found 3 marked UTF-8 strings

R CMD check generated the following check_fail:

1. rcmdcheck_non_ascii_characters_in_data

Test coverage with covr

Package coverage: 54.37

The following files are not completely covered by tests:

file	coverage
R/ovc_cpmrc.R	20%
R/ovc_munic.R	0%
R/ovc_provinces.R	0%
R/ovc_rccoor_distancia.R	19.64%
R/ovc_rccoor.R	19.64%
R/search_coords.R	0%
R/utils_wfs.R	26.04%
R/wfs_ad.R	18.52%
R/wfs_bu.R	40.48%
R/wfs_cp.R	14.29%
R/wms_all.R	24.07%

Cyclocomplexity with cyclocomp

The following function have cyclocomplexity >= 15:

function	cyclocomplexity
catr_set_cache_dir	15

Static code analyses with lintr

lintr found the following 26 potential issues:

message	number of times
Lines should not be more than 80 characters. This line is 101 characters.	1
Lines should not be more than 80 characters. This line is 107 characters.	3
Lines should not be more than 80 characters. This line is 108 characters.	1
Lines should not be more than 80 characters. This line is 109 characters.	2
Lines should not be more than 80 characters. This line is 110 characters.	1
Lines should not be more than 80 characters. This line is 122 characters.	2
Lines should not be more than 80 characters. This line is 123 characters.	1
Lines should not be more than 80 characters. This line is 127 characters.	1
Lines should not be more than 80 characters. This line is 128 characters.	1
Lines should not be more than 80 characters. This line is 141 characters.	1
Lines should not be more than 80 characters. This line is 142 characters.	1
Lines should not be more than 80 characters. This line is 82 characters.	3
Lines should not be more than 80 characters. This line is 87 characters.	1
Lines should not be more than 80 characters. This line is 88 characters.	3
Lines should not be more than 80 characters. This line is 90 characters.	3
Lines should not be more than 80 characters. This line is 98 characters.	1

---

Package Versions

package	version
pkgstats	0.1.3.9
pkgcheck	0.1.2.11