README.md

Example code for pydiverse pipedag

Installation / Activation

conda env create
conda activate pipedag_example

or

mamba env create
conda activate pipedag_example

or

pip install pydiverse-pipedag docker-compose psycopg2-binary kazoo

or

python -m venv pipedag_example
source pipedag_example/bin/activate
pip install pydiverse-pipedag docker-compose psycopg2-binary kazoo

Running test code

docker-compose up

and in another terminal

export POSTGRES_USERNAME=sa
export POSTGRES_PASSWORD=Pydiverse23
python run_pipeline.py

Finally, you may connect to your localhost postgres database pipedag_default and look at tables in schemas stage_1..stage_3.

If you don't have a SQL UI at hand, you may use psql command line tool inside the docker container. Check out the NAMES column in docker ps output. If the name of your postgres container is pipedag_example_postgres_1, then you can look at output tables like this:

docker exec pipedag_example_postgres_1 psql --username=sa --dbname=pipedag_default -c 'select * from stage_1.dfa;'

Or more interactively:

docker exec -t -i pipedag_example_postgres_1 bash
psql --username=sa --dbname=pipedag_default
\dt stage_*.*
select * from stage_2.task_2_out;