From 856482c17225bd1bde346a6329a437887610801e Mon Sep 17 00:00:00 2001 From: Jim Downie Date: Mon, 22 Apr 2024 11:18:18 +0100 Subject: [PATCH] Remove duplicated GO term --- assets/GOs.csv | 17 ++++++++--------- 1 file changed, 8 insertions(+), 9 deletions(-) diff --git a/assets/GOs.csv b/assets/GOs.csv index f975849..99189ee 100644 --- a/assets/GOs.csv +++ b/assets/GOs.csv @@ -298,7 +298,7 @@ GO:0009415,response to water,"Any process that results in a change in state or a GO:0009414,response to water deprivation,"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water." GO:1902427,regulation of water channel activity,"Any process that modulates the frequency, rate or extent of water channel activity." GO:0006833,water transport,"The directed movement of water (H2O) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore." -GO:0009992,intracellular water homeostasis,"A homeostatic process involved in the maintenance of a steady state level of water within a cell." +GO:0009992,intracellular water homeostasis,A homeostatic process involved in the maintenance of a steady state level of water within a cell. GO:0009651,response to salt stress,"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment." GO:0097501,stress response to metal ion,"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by a metal ion stimulus." GO:0030001,metal ion transport,"The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore." @@ -307,15 +307,14 @@ GO:0072348,sulfur compound transport,"The directed movement of compounds that co GO:0006791,sulfur utilization,"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary sulfur sources and then activates genes to scavenge the last traces of the primary sulfur source and to transport and metabolize alternate sulfur sources. The utilization process begins when the cell or organism detects sulfur levels, includes the activation of genes whose products detect, transport or metabolize sulfur-containing compounds, and ends when the sulfur is incorporated into the cell or organism's metabolism." GO:0044272,sulfur compound biosynthetic process,"The chemical reactions and pathways resulting in the formation of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione." GO:0050826,response to freezing,"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a freezing stimulus, temperatures below 0 degrees Celsius." -GO:0010286,heat acclimation,"Any process that increases heat tolerance of an organism in response to high temperatures." +GO:0010286,heat acclimation,Any process that increases heat tolerance of an organism in response to high temperatures. GO:0009409,response to cold,"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism." GO:0009266,response to temperature stimulus,"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a temperature stimulus." GO:0009271,phage shock,"A response by bacterial cells to a variety of stresses including filamentous phage infection, mislocalization of envelope proteins, extremes of temperature, osmolarity or ethanol concentration, and the presence of proton ionophores such as carbonylcyanide m-chlorophenylhydrazone (CCCP), that involves expression of the phage shock protein operon, and acts to protect the bacterial cells from damage." GO:0009631,cold acclimation,"Any process that increases freezing tolerance of an organism in response to low, nonfreezing temperatures." -GO:0035635,entry of bacterium into host cell,"The process in which a bacterium enters a host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction." -GO:0051410,detoxification of nitrogen compound,"Any process that reduces or removes the toxicity of nitrogenous compounds which are dangerous or toxic. This includes the aerobic conversion of toxic compounds to harmless substances." -GO:2001057,reactive nitrogen species metabolic process,"The chemical reactions and pathways involving a reactive nitrogen species." -GO:0006808,regulation of nitrogen utilization,"Any process that modulates the frequency, rate or extent of nitrogen utilization." +GO:0035635,entry of bacterium into host cell,The process in which a bacterium enters a host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction. +GO:0051410,detoxification of nitrogen compound,Any process that reduces or removes the toxicity of nitrogenous compounds which are dangerous or toxic. This includes the aerobic conversion of toxic compounds to harmless substances. +GO:2001057,reactive nitrogen species metabolic process,The chemical reactions and pathways involving a reactive nitrogen species. GO:0035713,response to nitrogen dioxide,"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen dioxide (NO2) stimulus." GO:0042128,nitrate assimilation,"The nitrogen metabolic process that encompasses the uptake of nitrate from the environment and reduction to ammonia, and results in the incorporation of nitrogen derived from nitrate into cellular substances." GO:0019740,nitrogen utilization,"A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary nitrogen source, usually ammonia, and then activates genes to scavenge the last traces of the primary nitrogen source and to transport and metabolize alternative nitrogen sources. The utilization process begins when the cell or organism detects nitrogen levels, includes the activation of genes whose products detect, transport or metabolize nitrogen-containing substances, and ends when nitrogen is incorporated into the cell or organism's metabolism." @@ -327,7 +326,7 @@ GO:2000895,hemicellulose catabolic process,The chemical reactions and pathways r GO:2000897,amylopectin catabolic process,The chemical reactions and pathways resulting in the breakdown of an amylopectin. GO:0009062,fatty acid catabolic process,"The chemical reactions and pathways resulting in the breakdown of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes." GO:0046170,methanol catabolic process,"The chemical reactions and pathways resulting in the breakdown of methanol, CH3-OH, a colorless, flammable, mobile, poisonous liquid, widely used as a solvent." -GO:1903457,lactate catabolic process,"The chemical reactions and pathways resulting in the breakdown of lactate." +GO:1903457,lactate catabolic process,The chemical reactions and pathways resulting in the breakdown of lactate. GO:0030245,cellulose catabolic process,"The chemical reactions and pathways resulting in the breakdown of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation." GO:0005983,starch catabolic process,"The chemical reactions and pathways resulting in the breakdown of starch, the most important reserve polysaccharide in plants." GO:0006032,chitin catabolic process,"The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of beta-(1->4)-linked N-acetyl-D-glucosamine residues." @@ -344,5 +343,5 @@ GO:0009733,response to auxin,"Any process that results in a change in state or a GO:0009850,auxin metabolic process,"The chemical reactions and pathways involving auxins, a group of plant hormones that regulate aspects of plant growth." GO:0009852,auxin catabolic process,"The chemical reactions and pathways resulting in the breakdown of auxins, a group of plant hormones that regulate aspects of plant growth." GO:0009739,response to gibberellin,"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus." -GO:0009685,gibberellin metabolic process,"The chemical reactions and pathways involving gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators." -GO:0045487,gibberellin catabolic process,"The chemical reactions and pathways resulting in the breakdown of gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators." +GO:0009685,gibberellin metabolic process,The chemical reactions and pathways involving gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators. +GO:0045487,gibberellin catabolic process,The chemical reactions and pathways resulting in the breakdown of gibberellin. Gibberellins are a class of highly modified terpenes that function as plant growth regulators. \ No newline at end of file