diff --git a/subworkflows/annotation.nf b/subworkflows/annotation.nf index b681d14..7c67981 100644 --- a/subworkflows/annotation.nf +++ b/subworkflows/annotation.nf @@ -56,6 +56,8 @@ workflow ANNOTATION { [ meta, fasta, [] ] } + ch_predictions_for_eggnog.View() + EGGNOG_MAPPER( ch_predictions_for_eggnog, eggnog_db @@ -65,12 +67,12 @@ workflow ANNOTATION { ch_annotations_to_merge = EGGNOG_MAPPER.out.annotations | groupTuple(by: 0) - CAT_EMAPPER(ch_annotations_to_merge, 5, "#") - ch_versions = ch_versions.mix(CAT_EMAPPER.out.versions) + // CAT_EMAPPER(ch_annotations_to_merge, 5, "#") + // ch_versions = ch_versions.mix(CAT_EMAPPER.out.versions) emit: contigs = MMSEQS_EASYCLUSTER.out.rep_fasta gff = params.assemblies_are_genes ? [] : METAEUK_EASYPREDICT.out.gff - annotations = CAT_EMAPPER.out.merged_annotation + // annotations = CAT_EMAPPER.out.merged_annotation versions = ch_versions } \ No newline at end of file