From c5094d60e0521a457c8d88c716affa56eea8cb49 Mon Sep 17 00:00:00 2001 From: Chris Hossenlopp Date: Mon, 13 Jan 2025 19:12:23 -0500 Subject: [PATCH 1/5] Update MongoDB github action to 1.12.0 --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index a0315bf9..ea41240e 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -19,7 +19,7 @@ jobs: node-version: ${{ matrix.node-version }} - name: Use MongoDB - uses: supercharge/mongodb-github-action@1.6.0 + uses: supercharge/mongodb-github-action@1.12.0 with: mongodb-version: ${{ matrix.mongodb-version }} From b88111a78d1d43397cbd1d3b10d374dd1c2d0362 Mon Sep 17 00:00:00 2001 From: Chris Hossenlopp Date: Tue, 14 Jan 2025 10:45:04 -0500 Subject: [PATCH 2/5] Update @shelf/jest-mongodb --- package-lock.json | 181 +++++++++++++++++++++++-------------------- service/package.json | 4 +- 2 files changed, 101 insertions(+), 84 deletions(-) diff --git a/package-lock.json b/package-lock.json index 9ea1f9b1..9d6d49f9 100644 --- a/package-lock.json +++ b/package-lock.json @@ -3229,19 +3229,20 @@ } }, "node_modules/@shelf/jest-mongodb": { - 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"dependencies": { - "debug": "^4.3.4" - }, + "license": "MIT", "engines": { "node": ">= 14" } @@ -4835,10 +4834,11 @@ "integrity": "sha512-baNZyqaaLhyLVKm/DlvdW051MSgO6b8eVfIezl9E5PqWxFgzLm/wQntEW4zOytVburDEr0JlALEpdOFwvErLsg==" }, "node_modules/async-mutex": { - "version": "0.4.0", - "resolved": "https://registry.npmjs.org/async-mutex/-/async-mutex-0.4.0.tgz", - "integrity": "sha512-eJFZ1YhRR8UN8eBLoNzcDPcy/jqjsg6I1AP+KvWQX80BqOSW1oJPJXDylPUEeMr2ZQvHgnQ//Lp6f3RQ1zI7HA==", + "version": "0.4.1", + "resolved": "https://registry.npmjs.org/async-mutex/-/async-mutex-0.4.1.tgz", + "integrity": "sha512-WfoBo4E/TbCX1G95XTjbWTE3X2XLG0m1Xbv2cwOtuPdyH9CZvnaA5nCt1ucjaKEgW2A5IF71hxrRhr83Je5xjA==", "dev": true, + "license": "MIT", "dependencies": { "tslib": "^2.4.0" } @@ -4896,10 +4896,11 @@ } }, "node_modules/b4a": { - "version": "1.6.4", - "resolved": "https://registry.npmjs.org/b4a/-/b4a-1.6.4.tgz", - "integrity": "sha512-fpWrvyVHEKyeEvbKZTVOeZF3VSKKWtJxFIxX/jaVPf+cLbGUSitjb49pHLqPV2BUNNZ0LcoeEGfE/YCpyDYHIw==", - 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"version": "7.0.2", - "resolved": "https://registry.npmjs.org/https-proxy-agent/-/https-proxy-agent-7.0.2.tgz", - "integrity": "sha512-NmLNjm6ucYwtcUmL7JQC1ZQ57LmHP4lT15FQ8D61nak1rO6DH+fz5qNK2Ap5UN4ZapYICE3/0KodcLYSPsPbaA==", + "version": "7.0.6", + "resolved": "https://registry.npmjs.org/https-proxy-agent/-/https-proxy-agent-7.0.6.tgz", + "integrity": "sha512-vK9P5/iUfdl95AI+JVyUuIcVtd4ofvtrOr3HNtM2yxC9bnMbEdp3x01OhQNnjb8IJYi38VlTE3mBXwcfvywuSw==", "dev": true, + "license": "MIT", "dependencies": { - "agent-base": "^7.0.2", + "agent-base": "^7.1.2", "debug": "4" }, "engines": { @@ -9959,13 +9966,14 @@ } }, "node_modules/mongodb-memory-server": { - "version": "9.1.1", - "resolved": "https://registry.npmjs.org/mongodb-memory-server/-/mongodb-memory-server-9.1.1.tgz", - "integrity": "sha512-ZOHOdb7//sBR2ea1lPHDPRaw8oO2MIfMdF+z82/KnzfNZ6yY6igR48cfG8u+QArKJQFsA392GMMHSevfPWsrRA==", + "version": "9.2.0", + "resolved": "https://registry.npmjs.org/mongodb-memory-server/-/mongodb-memory-server-9.2.0.tgz", + "integrity": "sha512-w/usKdYtby5EALERxmA0+et+D0brP0InH3a26shNDgGefXA61hgl6U0P3IfwqZlEGRZdkbZig3n57AHZgDiwvg==", "dev": true, "hasInstallScript": true, + "license": "MIT", "dependencies": { - "mongodb-memory-server-core": "9.1.1", + "mongodb-memory-server-core": "9.2.0", "tslib": "^2.6.2" }, "engines": { @@ -9973,23 +9981,24 @@ } }, "node_modules/mongodb-memory-server-core": { - "version": "9.1.1", - "resolved": "https://registry.npmjs.org/mongodb-memory-server-core/-/mongodb-memory-server-core-9.1.1.tgz", - "integrity": "sha512-5toYR4A7DfV5k+Qf6L9FG86baID2rPP/JYwp8TPrdm8ZzfTfyHTwQwa2BzVpSwmLoVW5gXN0znYmXiE68mImMg==", + "version": "9.2.0", + "resolved": "https://registry.npmjs.org/mongodb-memory-server-core/-/mongodb-memory-server-core-9.2.0.tgz", + "integrity": "sha512-9SWZEy+dGj5Fvm5RY/mtqHZKS64o4heDwReD4SsfR7+uNgtYo+JN41kPCcJeIH3aJf04j25i5Dia2s52KmsMPA==", "dev": true, + "license": "MIT", "dependencies": { "async-mutex": "^0.4.0", "camelcase": "^6.3.0", "debug": "^4.3.4", "find-cache-dir": "^3.3.2", - "follow-redirects": "^1.15.3", - "https-proxy-agent": "^7.0.2", + "follow-redirects": "^1.15.6", + "https-proxy-agent": "^7.0.4", "mongodb": "^5.9.1", "new-find-package-json": "^2.0.0", - "semver": "^7.5.4", - "tar-stream": "^3.0.0", + "semver": "^7.6.0", + "tar-stream": "^3.1.7", "tslib": "^2.6.2", - "yauzl": "^2.10.0" + "yauzl": "^3.1.3" }, "engines": { "node": ">=14.20.1" @@ -10000,6 +10009,7 @@ "resolved": "https://registry.npmjs.org/bson/-/bson-5.5.1.tgz", "integrity": "sha512-ix0EwukN2EpC0SRWIj/7B5+A6uQMQy6KMREI9qQqvgpkV2frH63T0UDVd1SYedL6dNCmDBYB3QtXi4ISk9YT+g==", "dev": true, + "license": "Apache-2.0", "engines": { "node": ">=14.20.1" } @@ -10009,6 +10019,7 @@ "resolved": "https://registry.npmjs.org/camelcase/-/camelcase-6.3.0.tgz", "integrity": "sha512-Gmy6FhYlCY7uOElZUSbxo2UCDH8owEk996gkbrpsgGtrJLM3J7jGxl9Ic7Qwwj4ivOE5AWZWRMecDdF7hqGjFA==", "dev": true, + "license": "MIT", "engines": { "node": ">=10" }, @@ -10021,6 +10032,7 @@ "resolved": "https://registry.npmjs.org/mongodb/-/mongodb-5.9.2.tgz", "integrity": "sha512-H60HecKO4Bc+7dhOv4sJlgvenK4fQNqqUIlXxZYQNbfEWSALGAwGoyJd/0Qwk4TttFXUOHJ2ZJQe/52ScaUwtQ==", "dev": true, + "license": "Apache-2.0", "dependencies": { "bson": "^5.5.0", "mongodb-connection-string-url": "^2.6.0", @@ -10122,6 +10134,7 @@ "resolved": "https://registry.npmjs.org/new-find-package-json/-/new-find-package-json-2.0.0.tgz", "integrity": "sha512-lDcBsjBSMlj3LXH2v/FW3txlh2pYTjmbOXPYJD93HI5EwuLzI11tdHSIpUMmfq/IOsldj4Ps8M8flhm+pCK4Ew==", "dev": true, + "license": "MIT", "dependencies": { "debug": "^4.3.4" }, @@ -10681,7 +10694,8 @@ "version": "1.2.0", "resolved": "https://registry.npmjs.org/pend/-/pend-1.2.0.tgz", "integrity": "sha512-F3asv42UuXchdzt+xXqfW1OGlVBe+mxa2mqI0pg5yAHZPvFmY3Y6drSf/GQ1A86WgWEN9Kzh/WrgKa6iGcHXLg==", - "dev": true + "dev": true, + "license": "MIT" }, "node_modules/picocolors": { "version": "1.0.0", @@ -10989,7 +11003,8 @@ "version": "1.0.1", "resolved": "https://registry.npmjs.org/queue-tick/-/queue-tick-1.0.1.tgz", "integrity": "sha512-kJt5qhMxoszgU/62PLP1CJytzd2NKetjSRnyuj31fDd3Rlcz3fzlFdFLD1SItunPwyqEOkca6GbV612BWfaBag==", - "dev": true + "dev": true, + "license": "MIT" }, "node_modules/range-parser": { "version": "1.2.1", @@ -11473,12 +11488,10 @@ } }, "node_modules/semver": { - "version": "7.5.4", - "resolved": "https://registry.npmjs.org/semver/-/semver-7.5.4.tgz", - "integrity": "sha512-1bCSESV6Pv+i21Hvpxp3Dx+pSD8lIPt8uVjRrxAUt/nbswYc+tK6Y2btiULjd4+fnq15PX+nqQDC7Oft7WkwcA==", - "dependencies": { - "lru-cache": "^6.0.0" - }, + "version": "7.6.3", + "resolved": "https://registry.npmjs.org/semver/-/semver-7.6.3.tgz", + "integrity": "sha512-oVekP1cKtI+CTDvHWYFUcMtsK/00wmAEfyqKfNdARm8u1wNVhSgaX7A8d4UuIlUI5e84iEwOhs7ZPYRmzU9U6A==", + "license": "ISC", "bin": { "semver": "bin/semver.js" }, @@ -11491,22 +11504,6 @@ "resolved": "https://registry.npmjs.org/semver-compare/-/semver-compare-1.0.0.tgz", "integrity": "sha512-YM3/ITh2MJ5MtzaM429anh+x2jiLVjqILF4m4oyQB18W7Ggea7BfqdH/wGMK7dDiMghv/6WG7znWMwUDzJiXow==" }, - "node_modules/semver/node_modules/lru-cache": { - "version": "6.0.0", - "resolved": "https://registry.npmjs.org/lru-cache/-/lru-cache-6.0.0.tgz", - "integrity": "sha512-Jo6dJ04CmSjuznwJSS3pUeWmd/H0ffTlkXXgwZi+eq1UCmqQwCh+eLsYOYCwY991i2Fah4h1BEMCx4qThGbsiA==", - "dependencies": { - "yallist": "^4.0.0" - }, - "engines": { - "node": ">=10" - } - }, - "node_modules/semver/node_modules/yallist": { - "version": "4.0.0", - "resolved": "https://registry.npmjs.org/yallist/-/yallist-4.0.0.tgz", - "integrity": "sha512-3wdGidZyq5PB084XLES5TpOSRA3wjXAlIWMhum2kRcv/41Sn2emQ0dycQW4uZXLejwKvg6EsvbdlVL+FYEct7A==" - }, "node_modules/send": { "version": "0.18.0", "resolved": "https://registry.npmjs.org/send/-/send-0.18.0.tgz", @@ -11943,13 +11940,18 @@ } }, "node_modules/streamx": { - "version": "2.15.6", - "resolved": "https://registry.npmjs.org/streamx/-/streamx-2.15.6.tgz", - "integrity": "sha512-q+vQL4AAz+FdfT137VF69Cc/APqUbxy+MDOImRrMvchJpigHj9GksgDU2LYbO9rx7RX6osWgxJB2WxhYv4SZAw==", + "version": "2.21.1", + "resolved": "https://registry.npmjs.org/streamx/-/streamx-2.21.1.tgz", + "integrity": "sha512-PhP9wUnFLa+91CPy3N6tiQsK+gnYyUNuk15S3YG/zjYE7RuPeCjJngqnzpC31ow0lzBHQ+QGO4cNJnd0djYUsw==", "dev": true, + "license": "MIT", "dependencies": { - "fast-fifo": "^1.1.0", - "queue-tick": "^1.0.1" + "fast-fifo": "^1.3.2", + "queue-tick": "^1.0.1", + "text-decoder": "^1.1.0" + }, + "optionalDependencies": { + "bare-events": "^2.2.0" } }, "node_modules/string_decoder": { @@ -12412,10 +12414,11 @@ } }, "node_modules/tar-stream": { - "version": "3.1.6", - "resolved": "https://registry.npmjs.org/tar-stream/-/tar-stream-3.1.6.tgz", - "integrity": "sha512-B/UyjYwPpMBv+PaFSWAmtYjwdrlEaZQEhMIBFNC5oEG8lpiW8XjcSdmEaClj28ArfKScKHs2nshz3k2le6crsg==", + "version": "3.1.7", + "resolved": "https://registry.npmjs.org/tar-stream/-/tar-stream-3.1.7.tgz", + "integrity": "sha512-qJj60CXt7IU1Ffyc3NJMjh6EkuCFej46zUqJ4J7pqYlThyd9bO0XBTmcOIhSzZJVWfsLks0+nle/j538YAW9RQ==", "dev": true, + "license": "MIT", "dependencies": { "b4a": "^1.6.4", "fast-fifo": "^1.2.0", @@ -12436,6 +12439,16 @@ "node": ">=8" } }, + "node_modules/text-decoder": { + "version": "1.2.3", + "resolved": "https://registry.npmjs.org/text-decoder/-/text-decoder-1.2.3.tgz", + "integrity": "sha512-3/o9z3X0X0fTupwsYvR03pJ/DjWuqqrfwBgTQzdWDiQSm9KitAyz/9WqsT2JQW7KV2m+bC2ol/zqpW37NHxLaA==", + "dev": true, + "license": "Apache-2.0", + "dependencies": { + "b4a": "^1.6.4" + } + }, "node_modules/text-hex": { "version": "1.0.0", "resolved": "https://registry.npmjs.org/text-hex/-/text-hex-1.0.0.tgz", @@ -13473,13 +13486,17 @@ } }, "node_modules/yauzl": { - "version": "2.10.0", - "resolved": "https://registry.npmjs.org/yauzl/-/yauzl-2.10.0.tgz", - "integrity": "sha512-p4a9I6X6nu6IhoGmBqAcbJy1mlC4j27vEPZX9F4L4/vZT3Lyq1VkFHw/V/PUcB9Buo+DG3iHkT0x3Qya58zc3g==", + "version": "3.2.0", + "resolved": "https://registry.npmjs.org/yauzl/-/yauzl-3.2.0.tgz", + "integrity": "sha512-Ow9nuGZE+qp1u4JIPvg+uCiUr7xGQWdff7JQSk5VGYTAZMDe2q8lxJ10ygv10qmSj031Ty/6FNJpLO4o1Sgc+w==", "dev": true, + "license": "MIT", "dependencies": { "buffer-crc32": "~0.2.3", - "fd-slicer": "~1.1.0" + "pend": "~1.2.0" + }, + "engines": { + "node": ">=12" } }, "node_modules/yn": { @@ -13526,7 +13543,7 @@ "zod": "^3.20.2" }, "devDependencies": { - "@shelf/jest-mongodb": "^4.1.4", + "@shelf/jest-mongodb": "^4.3.0", "@types/cors": "^2.8.13", "@types/express": "^4.17.17", "@types/fhir": "^0.0.35", diff --git a/service/package.json b/service/package.json index ecb14075..9f8a2eab 100644 --- a/service/package.json +++ b/service/package.json @@ -27,7 +27,7 @@ "test:watch": "jest --watch" }, "devDependencies": { - "@shelf/jest-mongodb": "^4.1.4", + "@shelf/jest-mongodb": "^4.3.0", "@types/cors": "^2.8.13", "@types/express": "^4.17.17", "@types/fhir": "^0.0.35", @@ -58,4 +58,4 @@ "uuid": "^9.0.0", "zod": "^3.20.2" } -} +} \ No newline at end of file From b48a1225a1f734c80787e8b62907af75a47440b6 Mon Sep 17 00:00:00 2001 From: Chris Hossenlopp Date: Tue, 14 Jan 2025 11:05:01 -0500 Subject: [PATCH 3/5] attempt newer version of mongodb in memory --- service/jest-mongodb-config.js | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/service/jest-mongodb-config.js b/service/jest-mongodb-config.js index 80efdda5..d1c44821 100644 --- a/service/jest-mongodb-config.js +++ b/service/jest-mongodb-config.js @@ -1,7 +1,7 @@ module.exports = { mongodbMemoryServerOptions: { binary: { - version: '6.0.1', + version: '6.0.19', skipMD5: true }, autoStart: false, From 4ba7282f47ea81a9aba0a016d0ede5b82c6fe9e1 Mon Sep 17 00:00:00 2001 From: Chris Hossenlopp Date: Tue, 14 Jan 2025 11:10:24 -0500 Subject: [PATCH 4/5] try no mongodb action --- .github/workflows/ci.yml | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index ea41240e..aa0fd259 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -8,7 +8,7 @@ jobs: strategy: matrix: node-version: [18.x] - mongodb-version: ["6.0"] + # mongodb-version: ["6.0"] steps: - uses: actions/checkout@v2 @@ -18,10 +18,10 @@ jobs: with: node-version: ${{ matrix.node-version }} - - name: Use MongoDB - uses: supercharge/mongodb-github-action@1.12.0 - with: - mongodb-version: ${{ matrix.mongodb-version }} + # - name: Use MongoDB + # uses: supercharge/mongodb-github-action@1.12.0 + # with: + # mongodb-version: ${{ matrix.mongodb-version }} - name: Setup Dependencies run: npm ci From 00a7989fc271d36ffd1942414ba3a2da5f18e115 Mon Sep 17 00:00:00 2001 From: Chris Hossenlopp Date: Tue, 14 Jan 2025 11:15:22 -0500 Subject: [PATCH 5/5] fully removed mongodb action that is not needed --- .github/workflows/ci.yml | 6 ------ 1 file changed, 6 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index aa0fd259..974e95a2 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -8,7 +8,6 @@ jobs: strategy: matrix: node-version: [18.x] - # mongodb-version: ["6.0"] steps: - uses: actions/checkout@v2 @@ -18,11 +17,6 @@ jobs: with: node-version: ${{ matrix.node-version }} - # - name: Use MongoDB - # uses: supercharge/mongodb-github-action@1.12.0 - # with: - # mongodb-version: ${{ matrix.mongodb-version }} - - name: Setup Dependencies run: npm ci