Error in rule generate_consensus_sequences V1.3

[jeroencremer]

Dear Developers,

Installation command: mamba create -n piranha -c bioconda piranha-polio=1.3 -y

It look like the same problem as "#242"
The problem still seems to be present in version 1.3
The adjustment may not have been included in the update!

Thanks in advance for the help.

error.txt

[aineniamh]

Hi @jeroencremer, we didn't create the bioconda recipe for piranha- I can see that the dependencies now differ on the recipe (here) from the ones on our environment.yaml file and that'll be the source of the issue with install- it all comes back to tensorflow and medaka, which are very finickity.

I believe it was rpetit3 who created the recipe for this repository. I'm not sure whether it's just a matter of doing a PR to update the dependencies to be in line with what we currently have for piranha in the environment file now.