.gitlab-ci.yml

variables:
  WEBDIR: /www/ProScan
  CRONTAB: /etc/cron.d/$CI_PROJECT_NAME

stages:
  - env
  - deploy
  - permissions

workflow:
  rules:
    # Never run pipeline in a deploy freeze window
    - if: $CI_DEPLOY_FREEZE != null
      when: never
    # Only run on commit pipelines
    - if: $CI_COMMIT_BRANCH
      when: always

Install requirements:
  stage: .pre
  script:
    - "which git || dnf -y install git"
    - "which git-lfs || dnf -y install git-lfs"

Install Conda Packages:
  stage: env
  rules:
    - changes:
        - environment.yml
  script:
    - "which conda || source /www/cgi-bin/miniconda3/etc/profile.d/conda.sh"
    - "which mamba || conda install -c conda-forge -y mamba"
    - "mamba env update -f $CI_PROJECT_DIR/environment.yml"
    - "restorecon -r /www/cgi-bin/miniconda3"
    - "/www/cgi-bin/miniconda3/envs/wsgi/bin/mod_wsgi-express module-config >  /etc/httpd/conf.modules.d/10-wsgi.conf"

Copy Crontab:
  stage: env
  rules:
    - changes:
        - crontab
  script:
    - "/usr/bin/cp $CI_PROJECT_DIR/crontab $CRONTAB"

Deploy:
  stage: deploy
  script:
    - "[[ -d $WEBDIR ]] || git clone $CI_REPOSITORY_URL $WEBDIR"
    - "cd $WEBDIR"
    - "git pull"

Fix Rundir Owner:
  stage: permissions
  rules:
    - exists:
        - runs
  script:
    - "chown -R apache $WEBDIR/runs"

Fix SELinux Contexts:
  stage: permissions
  script:
    - "restorecon -r $WEBDIR"

Fix File Permissions:
  stage: permissions
  rules:
    - if: $CI_COMMIT_BRANCH != $CI_DEFAULT_BRANCH
  script:
    - "chgrp -R 'pierce group' $WEBDIR"
    - "chmod -R g=u $WEBDIR"

Restart Apache:
  stage: .post
  script:
    - "systemctl reload httpd"