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data.js
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/**
* @license
* Copyright 2018 Google LLC. All Rights Reserved.
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
* =============================================================================
*/
import * as tf from '@tensorflow/tfjs';
export const IRIS_CLASSES =
['Iris-setosa', 'Iris-versicolor', 'Iris-virginica'];
export const IRIS_NUM_CLASSES = IRIS_CLASSES.length;
export const IRIS_NUM_FEATURES = 4;
// Iris flowers data. Source:
// https://archive.ics.uci.edu/ml/machine-learning-databases/iris/iris.data
export const IRIS_RAW_DATA = [
[5.1, 3.5, 1.4, 0.2, 0], [4.9, 3.0, 1.4, 0.2, 0], [4.7, 3.2, 1.3, 0.2, 0],
[4.6, 3.1, 1.5, 0.2, 0], [5.0, 3.6, 1.4, 0.2, 0], [5.4, 3.9, 1.7, 0.4, 0],
[4.6, 3.4, 1.4, 0.3, 0], [5.0, 3.4, 1.5, 0.2, 0], [4.4, 2.9, 1.4, 0.2, 0],
[4.9, 3.1, 1.5, 0.1, 0], [5.4, 3.7, 1.5, 0.2, 0], [4.8, 3.4, 1.6, 0.2, 0],
[4.8, 3.0, 1.4, 0.1, 0], [4.3, 3.0, 1.1, 0.1, 0], [5.8, 4.0, 1.2, 0.2, 0],
[5.7, 4.4, 1.5, 0.4, 0], [5.4, 3.9, 1.3, 0.4, 0], [5.1, 3.5, 1.4, 0.3, 0],
[5.7, 3.8, 1.7, 0.3, 0], [5.1, 3.8, 1.5, 0.3, 0], [5.4, 3.4, 1.7, 0.2, 0],
[5.1, 3.7, 1.5, 0.4, 0], [4.6, 3.6, 1.0, 0.2, 0], [5.1, 3.3, 1.7, 0.5, 0],
[4.8, 3.4, 1.9, 0.2, 0], [5.0, 3.0, 1.6, 0.2, 0], [5.0, 3.4, 1.6, 0.4, 0],
[5.2, 3.5, 1.5, 0.2, 0], [5.2, 3.4, 1.4, 0.2, 0], [4.7, 3.2, 1.6, 0.2, 0],
[4.8, 3.1, 1.6, 0.2, 0], [5.4, 3.4, 1.5, 0.4, 0], [5.2, 4.1, 1.5, 0.1, 0],
[5.5, 4.2, 1.4, 0.2, 0], [4.9, 3.1, 1.5, 0.1, 0], [5.0, 3.2, 1.2, 0.2, 0],
[5.5, 3.5, 1.3, 0.2, 0], [4.9, 3.1, 1.5, 0.1, 0], [4.4, 3.0, 1.3, 0.2, 0],
[5.1, 3.4, 1.5, 0.2, 0], [5.0, 3.5, 1.3, 0.3, 0], [4.5, 2.3, 1.3, 0.3, 0],
[4.4, 3.2, 1.3, 0.2, 0], [5.0, 3.5, 1.6, 0.6, 0], [5.1, 3.8, 1.9, 0.4, 0],
[4.8, 3.0, 1.4, 0.3, 0], [5.1, 3.8, 1.6, 0.2, 0], [4.6, 3.2, 1.4, 0.2, 0],
[5.3, 3.7, 1.5, 0.2, 0], [5.0, 3.3, 1.4, 0.2, 0], [7.0, 3.2, 4.7, 1.4, 1],
[6.4, 3.2, 4.5, 1.5, 1], [6.9, 3.1, 4.9, 1.5, 1], [5.5, 2.3, 4.0, 1.3, 1],
[6.5, 2.8, 4.6, 1.5, 1], [5.7, 2.8, 4.5, 1.3, 1], [6.3, 3.3, 4.7, 1.6, 1],
[4.9, 2.4, 3.3, 1.0, 1], [6.6, 2.9, 4.6, 1.3, 1], [5.2, 2.7, 3.9, 1.4, 1],
[5.0, 2.0, 3.5, 1.0, 1], [5.9, 3.0, 4.2, 1.5, 1], [6.0, 2.2, 4.0, 1.0, 1],
[6.1, 2.9, 4.7, 1.4, 1], [5.6, 2.9, 3.6, 1.3, 1], [6.7, 3.1, 4.4, 1.4, 1],
[5.6, 3.0, 4.5, 1.5, 1], [5.8, 2.7, 4.1, 1.0, 1], [6.2, 2.2, 4.5, 1.5, 1],
[5.6, 2.5, 3.9, 1.1, 1], [5.9, 3.2, 4.8, 1.8, 1], [6.1, 2.8, 4.0, 1.3, 1],
[6.3, 2.5, 4.9, 1.5, 1], [6.1, 2.8, 4.7, 1.2, 1], [6.4, 2.9, 4.3, 1.3, 1],
[6.6, 3.0, 4.4, 1.4, 1], [6.8, 2.8, 4.8, 1.4, 1], [6.7, 3.0, 5.0, 1.7, 1],
[6.0, 2.9, 4.5, 1.5, 1], [5.7, 2.6, 3.5, 1.0, 1], [5.5, 2.4, 3.8, 1.1, 1],
[5.5, 2.4, 3.7, 1.0, 1], [5.8, 2.7, 3.9, 1.2, 1], [6.0, 2.7, 5.1, 1.6, 1],
[5.4, 3.0, 4.5, 1.5, 1], [6.0, 3.4, 4.5, 1.6, 1], [6.7, 3.1, 4.7, 1.5, 1],
[6.3, 2.3, 4.4, 1.3, 1], [5.6, 3.0, 4.1, 1.3, 1], [5.5, 2.5, 4.0, 1.3, 1],
[5.5, 2.6, 4.4, 1.2, 1], [6.1, 3.0, 4.6, 1.4, 1], [5.8, 2.6, 4.0, 1.2, 1],
[5.0, 2.3, 3.3, 1.0, 1], [5.6, 2.7, 4.2, 1.3, 1], [5.7, 3.0, 4.2, 1.2, 1],
[5.7, 2.9, 4.2, 1.3, 1], [6.2, 2.9, 4.3, 1.3, 1], [5.1, 2.5, 3.0, 1.1, 1],
[5.7, 2.8, 4.1, 1.3, 1], [6.3, 3.3, 6.0, 2.5, 2], [5.8, 2.7, 5.1, 1.9, 2],
[7.1, 3.0, 5.9, 2.1, 2], [6.3, 2.9, 5.6, 1.8, 2], [6.5, 3.0, 5.8, 2.2, 2],
[7.6, 3.0, 6.6, 2.1, 2], [4.9, 2.5, 4.5, 1.7, 2], [7.3, 2.9, 6.3, 1.8, 2],
[6.7, 2.5, 5.8, 1.8, 2], [7.2, 3.6, 6.1, 2.5, 2], [6.5, 3.2, 5.1, 2.0, 2],
[6.4, 2.7, 5.3, 1.9, 2], [6.8, 3.0, 5.5, 2.1, 2], [5.7, 2.5, 5.0, 2.0, 2],
[5.8, 2.8, 5.1, 2.4, 2], [6.4, 3.2, 5.3, 2.3, 2], [6.5, 3.0, 5.5, 1.8, 2],
[7.7, 3.8, 6.7, 2.2, 2], [7.7, 2.6, 6.9, 2.3, 2], [6.0, 2.2, 5.0, 1.5, 2],
[6.9, 3.2, 5.7, 2.3, 2], [5.6, 2.8, 4.9, 2.0, 2], [7.7, 2.8, 6.7, 2.0, 2],
[6.3, 2.7, 4.9, 1.8, 2], [6.7, 3.3, 5.7, 2.1, 2], [7.2, 3.2, 6.0, 1.8, 2],
[6.2, 2.8, 4.8, 1.8, 2], [6.1, 3.0, 4.9, 1.8, 2], [6.4, 2.8, 5.6, 2.1, 2],
[7.2, 3.0, 5.8, 1.6, 2], [7.4, 2.8, 6.1, 1.9, 2], [7.9, 3.8, 6.4, 2.0, 2],
[6.4, 2.8, 5.6, 2.2, 2], [6.3, 2.8, 5.1, 1.5, 2], [6.1, 2.6, 5.6, 1.4, 2],
[7.7, 3.0, 6.1, 2.3, 2], [6.3, 3.4, 5.6, 2.4, 2], [6.4, 3.1, 5.5, 1.8, 2],
[6.0, 3.0, 4.8, 1.8, 2], [6.9, 3.1, 5.4, 2.1, 2], [6.7, 3.1, 5.6, 2.4, 2],
[6.9, 3.1, 5.1, 2.3, 2], [5.8, 2.7, 5.1, 1.9, 2], [6.8, 3.2, 5.9, 2.3, 2],
[6.7, 3.3, 5.7, 2.5, 2], [6.7, 3.0, 5.2, 2.3, 2], [6.3, 2.5, 5.0, 1.9, 2],
[6.5, 3.0, 5.2, 2.0, 2], [6.2, 3.4, 5.4, 2.3, 2], [5.9, 3.0, 5.1, 1.8, 2],
];
/**
* Converts an integer into its one-hot representation and returns
* the data as a JS Array.
*/
export function flatOneHot(idx) {
// TODO(bileschi): Remove 'Array.from' from here once tf.data supports typed
// arrays https://github.com/tensorflow/tfjs/issues/1041
// TODO(bileschi): Remove '.dataSync()' from here once tf.data supports
// datasets built from tensors.
// https://github.com/tensorflow/tfjs/issues/1046
return Array.from(tf.oneHot([idx], 3).dataSync());
}
/**
* Obtains Iris data, split into training and test sets and with the label
* converted into one-hot format.
*
* @param testSplit Fraction of the data at the end to split as test data: a
* number between 0 and 1.
*
* @param returns A list of two datasets, [trainingData, testingData].
* The datasets represent a shuffled partition of the raw IRIS data.
* Elements of the yielded data will consist of [Features, Labels].
* - Features as a rank-1 `Tensor` of length-4 of numbers.
* - Labels as a rank-1 `Tensor` in one-hot format.
*/
export async function getIrisData(testSplit) {
// TODO(bileschi): Update shuffle etc. to use the tf.data API calls once
// it is possible to cache the results for performance and train-test split
// stability across epochs. Once caching is available, perform batching first
// and then map the preprocessing functions across the batches.
// https://github.com/tensorflow/tfjs/issues/1025
// Shuffle a copy of the raw data.
const shuffled = IRIS_RAW_DATA.slice();
tf.util.shuffle(shuffled);
// Split the data into training and testing portions.
const numTestExamples = Math.round(IRIS_RAW_DATA.length * testSplit);
const numTrainExamples = IRIS_RAW_DATA.length - numTestExamples;
const train = shuffled.slice(0, numTrainExamples);
const test = shuffled.slice(numTrainExamples);
// Split the data into into X & y and apply feature mapping transformations
const trainX = tf.data.array(train.map(r => r.slice(0, 4)));
const testX = tf.data.array(test.map(r => r.slice(0, 4)));
// TODO(we should be able to just directly use tensors built from oneHot here
// instead of converting to tensor and back using datasync & Array.from.
// This causes an internal disposal error however.
// See https://github.com/tensorflow/tfjs/issues/1071
//
// const trainY = tf.data.array(train.map(r => tf.oneHot([r[4]], 3)));
// const testY = tf.data.array(test.map(r => tf.oneHot([r[4]], 3)));
const trainY = tf.data.array(train.map(r => flatOneHot(r[4])));
const testY = tf.data.array(test.map(r => flatOneHot(r[4])));
// Recombine the X and y portions of the data.
const trainDataset = tf.data.zip({xs: trainX, ys: trainY});
const testDataset = tf.data.zip({xs: testX, ys: testY});
return [trainDataset, testDataset];
}