Repositories list

• graphql-server

  Public
  A GraphQL server that supports the Legume Information System and related biodata websites

  graphqlmicroservicestypescript+ 3biologyinterminelegumes

  TypeScript

  •

  Apache License 2.0

  •3•2•9•2•Updated Nov 14, 2024Nov 14, 2024

• datastore-metadata

  Public
  All the LIS Datastore YAML files under one roof.

  0•0•0•0•Updated Nov 14, 2024Nov 14, 2024

• gene-function-registry

  Public
  A set of records (pages) for collecting information about gene function in a human- and machine-readable format.

  Perl

  •2•0•0•8•Updated Nov 14, 2024Nov 14, 2024

• web-components-graphql

  Public
  A TypeScript library that provides code for usng LIS Web Components with the LIS GraphQL Server

  JavaScript

  •

  Apache License 2.0

  •0•0•0•6•Updated Nov 13, 2024Nov 13, 2024

• microservices

  Public
  A collection of microservices developed and maintained by the Legume Information System

  pythonredisbioinformatics+ 4asynciodockermicroservicesgrpc

  Python

  •

  Apache License 2.0

  •1•3•19•66•Updated Nov 13, 2024Nov 13, 2024

• datastore-specifications

  Public
  Specifications for directory naming, file naming, file contents in the LIS datastore

  Perl

  •0•2•14•0•Updated Nov 13, 2024Nov 13, 2024

• web-components

  Public
  A collection of Web Components for interacting with and visualizing biological data.

  typescriptbiologyweb-components+ 2litlegumes

  TypeScript

  •

  Apache License 2.0

  •3•5•8•5•Updated Nov 13, 2024Nov 13, 2024

• LIS-autocontent

  Public
  Scrapes the LIS datastore and populates various configs and databases for deployment

  Python

  •

  Apache License 2.0

  •1•0•16•0•Updated Nov 12, 2024Nov 12, 2024

• website-ui-specs

  Public
  User interface specification of components built for the Jekyll sites.

  Apache License 2.0

  •0•0•4•0•Updated Nov 7, 2024Nov 7, 2024

• lis_gis

  Public
  Geographic map browser for LIS germplasm accession and trait evaluation data

  JavaScript

  •

  GNU General Public License v3.0

  •1•0•4•0•Updated Nov 7, 2024Nov 7, 2024

• legumeinfo.org

  Public
  general site issues (or a place to log issues if you just want to put them somewhere and triage which repository they properly belong to later)

  HTML

  •0•0•14•0•Updated Oct 29, 2024Oct 29, 2024

• jekyll-legumeinfo

  Public
  legumeinfo.org built with Jekyll and served on GitHub Pages

  HTML

  •

  Apache License 2.0

  •1•4•11•1•Updated Oct 29, 2024Oct 29, 2024

• vignamine

  Public
  A mine with Vigna data from the LIS Datastore

  Java

  •

  GNU Lesser General Public License v3.0

  •0•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• phaseolusmine

  Public
  An InterMine for Phaseolus species

  Java

  •

  GNU Lesser General Public License v3.0

  •0•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• medicagomine

  Public
  A mine for Medicago truncatula and Medicago sativa

  Java

  •

  GNU Lesser General Public License v3.0

  •1•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• lupinusmine

  Public
  An InterMine containing Lupinus data from the LIS datastore.

  Java

  •

  GNU Lesser General Public License v3.0

  •0•0•1•0•Updated Oct 28, 2024Oct 28, 2024

• lensmine

  Public
  Lens data from LIS

  Java

  •

  GNU Lesser General Public License v3.0

  •0•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• legumemine

  Public
  An InterMine which contains multiple legumes

  Java

  •

  GNU Lesser General Public License v3.0

  •0•0•1•0•Updated Oct 28, 2024Oct 28, 2024

• cicermine

  Public
  The new Cicer mine including wild type species

  Java

  •

  GNU Lesser General Public License v3.0

  •0•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• cajanusmine

  Public
  intermine instance for data from Cajanus genus

  Java

  •

  GNU Lesser General Public License v3.0

  •0•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• arachismine

  Public
  A mine containing Arachis duranensis, Arachis ipaensis, and Arachis hypogaea.

  Java

  •

  GNU Lesser General Public License v3.0

  •0•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• aeschynomenemine

  Public
  AeschynomeneMine

  Java

  •

  GNU Lesser General Public License v3.0

  •0•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• glycinemine

  Public
  An InterMine for Glycine species

  Java

  •

  GNU Lesser General Public License v3.0

  •1•0•0•0•Updated Oct 28, 2024Oct 28, 2024

• jekyll-starter-legumeinfo

  Public
  A Jekyll site that demonstrates how to use the legumeinfo Jekyll theme

  jekylljekyll-themebiology+ 3uikitweb-componentslegumes

  HTML

  •

  Apache License 2.0

  •1•1•1•0•Updated Oct 24, 2024Oct 24, 2024

• jekyll-theme-legumeinfo

  Public
  A Jekyll theme for the Legume Information System and related biodata websites

  jekylljekyll-themebiology+ 3uikitweb-componentslegumes

  JavaScript

  •

  Apache License 2.0

  •1•1•5•1•Updated Oct 24, 2024Oct 24, 2024

• docker-intermine-gradle

  Public
  Docker for InterMine

  Shell

  •

  GNU Lesser General Public License v2.1

  •19•1•0•0•Updated Oct 24, 2024Oct 24, 2024

• DSCensor

  Public
  Process LIS Datastore and Provide Web Facing RESTFUL API

  Python

  •

  Apache License 2.0

  •0•0•1•1•Updated Oct 14, 2024Oct 14, 2024

• pandagma

  Public
  Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.

  Shell

  •

  BSD 3-Clause "New" or "Revised" License

  •1•13•0•0•Updated Oct 10, 2024Oct 10, 2024

• sven-documentation

  Public
  0•0•0•0•Updated Sep 30, 2024Sep 30, 2024

• jbrowse-plugin-gwas

  Public
  TypeScript

  •1•0•0•0•Updated Sep 30, 2024Sep 30, 2024