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activator_activity.yaml
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pattern_name: 'activator_activity'
classes:
'molecular_function':'GO:0003674'
'catalytic activity':'GO:0003824'
relations:
'directly positively regulates':'RO:0002629'
vars:
'regulated_activity':"catalytic activity"
substitutions:
-
in: regulated_activity
out: regulated_activity_munged
match: "(.+) activity"
sub: '\1'
data_list_vars:
def_dbxrefs: "xsd:string"
# Boilerplate - don't edit
data_list_vars:
def_xrefs: "xsd:string"
cross_references: "xsd:string"
exact_syn: "xsd:string"
narrow_syn: "xsd:string"
broad_syn: "xsd:string"
related_syn: "xsd:string"
name:
text: "%s activator activity"
vars:
- 'regulated_activity_munged'
def:
text: "Direct interaction with a gene product or complex that has %s,
resulting in positive regulation of its %s. Direct interaction
in this case includes binding and interactions leading to
covalent modification."
vars:
- 'regulated_activity'
- 'regulated_activity'
xrefs: # Boilerplate - don't edit
value: def_xrefs
# Boilerplate - don't edit
xrefs:
value: cross_references
namespace:
text: 'biological_process' # e.g. biological_process, quoting is optional
equivalentTo:
text: "'molecular_function' that 'directly positively regulates' some %s"
vars:
- 'regulated_activity'
# Boilerplate - don't edit
exact_synonyms:
value: exact_syn
narrow_synonyms:
value: narrow_syn
broad_synonyms:
value: broad_syn
related_synonyms:
value: related_syn