Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

NTR: breath specimen, breath assay #1668

Closed
johnwjudkins opened this issue Mar 9, 2023 · 4 comments
Closed

NTR: breath specimen, breath assay #1668

johnwjudkins opened this issue Mar 9, 2023 · 4 comments

Comments

@johnwjudkins
Copy link
Contributor

NCIT has Breath test, but I think it might be worth having an OBI term for a breath assay that fits the design pattern for other assay and specimen types (like blood assay). The specimen is gas exhaled from the body that can be analyzed for H2, CH4, CO2, etc. This specimen includes not only air from the lungs but also the GI system.

To fit the design pattern, we'd want an UBERON term for the bearer of the specimen role. UBERON has excreted gas, but only the excreted gas from the mouth is collected for a breath test.

@johnwjudkins
Copy link
Contributor Author

2023-04-03: I will request new term in UBERON - something like "gas excreted from mouth".

@johnwjudkins
Copy link
Contributor Author

obophenotype/uberon#2863

@johnwjudkins
Copy link
Contributor Author

VEuPath's ontology is no longer in active development, so I'm not opposed to closing this, but feel free to keep it open if there is any interest.

@ddooley
Copy link
Contributor

ddooley commented Nov 6, 2023

We'll need an active proponent/ontology to push this request forward, so closing unless someone wants to step forward to reopen.

@ddooley ddooley closed this as completed Nov 6, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

4 participants