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Invalid data when outputting uncompressed NIfTIs #365

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mgxd opened this issue Aug 8, 2019 · 0 comments · May be fixed by #802
Open

Invalid data when outputting uncompressed NIfTIs #365

mgxd opened this issue Aug 8, 2019 · 0 comments · May be fixed by #802
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bug good-first-issue
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0.10.0

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@mgxd
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mgxd commented Aug 8, 2019

When setting a key to outtype=('nii',), heudiconv executes successfully but produces invalid data.

A workaround is to use the --dcmconfig flag with the following config option:

{
    "compress": "n"
}
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[WIP] Handle dcm2niix not compressing nifti files MPIB/heudiconv
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@yarikoptic @mgxd