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CHANGELOG.md

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Changelog (PsyTrack)

2.0.1 (January 13, 2021)

  • Update to README to reflect publication in Neuron.

2.0.0 (November 21, 2020)

  • Primarily superficial changes ahead of the release of final paper.

1.3.0 (April 18, 2020)

  • Added a hess_calc argument to recoverSim to control whether error bars are calculated in the recovery of simulated weights.
  • Added a hess_calc argument to crossValidate to control whether error bars are calculated in the recovery of simulated weights.
  • Change display of error bars from 2 standard errors, to 1.96 which maps more precisely to a 95% credible interval.
  • Update the analysis function to handle s_a and s_b as inputs.
  • Update the analysis function to better plot session boundaries.
  • Update the analysis function to handle Left/Right sides coded as {0,1}, as well as {1,2}.
  • The default z-order (plotting order) of different inputs can now be accessed through psy.ZORDER, similar to psy.COLORS.
  • Made a few superficial updates to the tutorial notebook.

1.2.0 (February 16, 2020)

  • This may not be a backward compatible update, apologies in advance!
  • Added functionality to hyperOpt for returning error bars for the weights returned in best_wMode by setting the keyword argument hess_calc.
  • Added functionality to hyperOpt for returning error bars for the hyperparameters returned in best_hyper by setting the keyword argument hess_calc.
  • Added check to getMap raise error if choices y are not formatted correctly.
  • Corrected a minor zero-indexing bug in the cross-validation code.
  • Adjusted runSim code to simulate and recover models using the sigDay functionality.
  • Update documentation to clarify that the order of weights returned in wMode is alphabetical with respect to the dictionary weights.
  • Adjust the __init__.py file to make commonly used functions more directly accessible.
  • Large improvements in the plotting functions, including more modularity and configurability.
  • Made cross-validation much more straightforward, should be able to get log-likelihood direct from a single function now.
  • Refresh of tutorial notebook

1.1.0 (June 18, 2019)

  • Rename aux folder to helper to allow for installation in Windows systems