From f95019ea7fd55e080bf500b984692d62b7fda4c6 Mon Sep 17 00:00:00 2001 From: EladH1 Date: Wed, 22 Jan 2025 21:41:19 +0100 Subject: [PATCH] profile: sv -> structural --- nextflow.config | 18 +++++++++--------- 1 file changed, 9 insertions(+), 9 deletions(-) diff --git a/nextflow.config b/nextflow.config index 2badde6..82b5e24 100644 --- a/nextflow.config +++ b/nextflow.config @@ -186,15 +186,15 @@ profiles { executor.cpus = 4 executor.memory = 8.GB } - test { includeConfig 'conf/test.config' } - test_full { includeConfig 'conf/test_full.config' } - germline_small { includeConfig 'conf/tests/germline_small.config'} - germline_sv { includeConfig 'conf/tests/germline_sv.config' } - somatic_snv { includeConfig 'conf/tests/somatic_snv.config' } - somatic_indel { includeConfig 'conf/tests/somatic_indel.config' } - somatic_sv { includeConfig 'conf/tests/somatic_sv.config' } - liftover_test { includeConfig 'conf/tests/liftover_test.config' } - liftover_truth { includeConfig 'conf/tests/liftover_truth.config' } + test { includeConfig 'conf/test.config' } + test_full { includeConfig 'conf/test_full.config' } + germline_small { includeConfig 'conf/tests/germline_small.config'} + germline_structural { includeConfig 'conf/tests/germline_sv.config' } + somatic_snv { includeConfig 'conf/tests/somatic_snv.config' } + somatic_indel { includeConfig 'conf/tests/somatic_indel.config' } + somatic_structural { includeConfig 'conf/tests/somatic_sv.config' } + liftover_test { includeConfig 'conf/tests/liftover_test.config' } + liftover_truth { includeConfig 'conf/tests/liftover_truth.config' } }