Version 1.11.2

This release changes a few instances using Python's built-in int data type to np.int64. This should solve issues for Windows users where the default int type is only 32bit.

Version 1.11.1

This minor release adds a single straggler:

• new function, flywire.get_lr_position determines left/right side for given xyz coordinates

Version 1.11.0

This release contains among other things:

1. Various improvements for FlyWire annotation-related functions
2. New function: flywire.neuroglancer.neuron_to_url takes a skeleton and creates a link with overlapping FlyWire segments
3. flywire.update_ids now uses L2 IDs (instead of supervoxels) to determine which downstream root ID is the most likely successor. This is noticeable faster.
4. flywire.get_annotation_tables has been deprecated in favor of flywire.list_annotation_tables

Version 1.10.0

Small improvements and fixes:

• l2_skeletons now uses threads and add radius (if available)
• l2_dotprops now has an option to sub-sample the points
• to fix issues with Windows where int defaults to 32bit, we now explicitly use np.int64 when dealing with root IDs
• new function: flywire.get_neuropil_volumes will load neuropil meshes
• flywire.encode_url now includes a (hidden) layer with brain mesh
• various bug fixes

Version 1.9.0

• new functions: flywire.get_lineage_graph, flywire.get_voxels, flywire.is_proofread (see docs for details)
• added more/better retrying for L2 functions (e.g. flywire.l2_dotprops)
• fixed a couple issues with FlyWire root IDs and int on Windows
• various bug fixes

Version 1.8.0

Critically this version updates to the URLs for the servers hosting the FAFB14 <-> FlyWire deformation fields and FlyWire supervoxel lookups (required e.g. for flywire.locs_to_segments/supervoxels.

Additional changes/improvements:

• flywire.update_ids now accepts optional supervoxels to speed-up updating root IDs
• added checks to catch invalid root/supervoxel IDs throughout flywire functions

Version 1.7.0

Various improvements to the FlyWire synapse/connectivity functions.

Version 1.6.3

Small fix in flywire.l2_skeleton.

Version 1.6.2

Fix bug in flywire.l2_skeleton take 2.

Version 1.6.1

Fixes a logical error in flywire.l2_skeleton.