Releases: navis-org/fafbseg-py
Releases · navis-org/fafbseg-py
Version 1.11.2
This release changes a few instances using Python's built-in int
data type to np.int64
. This should solve issues for Windows users where the default int
type is only 32bit.
Version 1.11.1
This minor release adds a single straggler:
- new function,
flywire.get_lr_position
determines left/right side for given xyz coordinates
Version 1.11.0
This release contains among other things:
- Various improvements for FlyWire annotation-related functions
- New function:
flywire.neuroglancer.neuron_to_url
takes a skeleton and creates a link with overlapping FlyWire segments flywire.update_ids
now uses L2 IDs (instead of supervoxels) to determine which downstream root ID is the most likely successor. This is noticeable faster.flywire.get_annotation_tables
has been deprecated in favor offlywire.list_annotation_tables
Version 1.10.0
Small improvements and fixes:
l2_skeletons
now uses threads and add radius (if available)l2_dotprops
now has an option to sub-sample the points- to fix issues with Windows where
int
defaults to 32bit, we now explicitly usenp.int64
when dealing with root IDs - new function:
flywire.get_neuropil_volumes
will load neuropil meshes flywire.encode_url
now includes a (hidden) layer with brain mesh- various bug fixes
Version 1.9.0
- new functions:
flywire.get_lineage_graph
,flywire.get_voxels
,flywire.is_proofread
(see docs for details) - added more/better retrying for L2 functions (e.g.
flywire.l2_dotprops
) - fixed a couple issues with FlyWire root IDs and
int
on Windows - various bug fixes
Version 1.8.0
Critically this version updates to the URLs for the servers hosting the FAFB14 <-> FlyWire deformation fields and FlyWire supervoxel lookups (required e.g. for flywire.locs_to_segments/supervoxels
.
Additional changes/improvements:
flywire.update_ids
now accepts optionalsupervoxels
to speed-up updating root IDs- added checks to catch invalid root/supervoxel IDs throughout
flywire
functions
Version 1.7.0
Various improvements to the FlyWire synapse/connectivity functions.
Version 1.6.3
Small fix in flywire.l2_skeleton
.
Version 1.6.2
Fix bug in flywire.l2_skeleton
take 2.
Version 1.6.1
Fixes a logical error in flywire.l2_skeleton
.