python-crop-image.yml

# This workflow will install Python dependencies, run tests and lint with a single version of Python
# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python

name: Crop Image

on:
  push:
    branches: [ "main" ]
  pull_request:
    branches: [ "main" ]

permissions:
  contents: read

jobs:
  build:

    runs-on: ubuntu-latest

    steps:
    - uses: actions/checkout@v4
    # - name: Set up Python 
    #   uses: actions/setup-python@v3
    #   with:
    #     python-version: "3.9.21"
    - name: Set up Conda
      uses: conda-incubator/setup-miniconda@v2
      with:
        python-version: 3.11
        environment-file: environment.yml
        auto-update-conda: true
        activate-environment: classification
    # - name: Install dependencies
    #   run: |
    #     python -m pip install --upgrade pip
    #     pip install -r requirements.txt
    # - name: Install GDAL dependencies
    #   run: |
    #     sudo apt-get update
    #     sudo apt-get install -y gdal-bin libgdal-dev

    # - name: Install Python dependencies
    #   run: |
    #     pip install --upgrade pip
    #     pip install pygdal==$(gdal-config --version).* --global-option=build_ext --global-option="-I$(gdal-config --cflags | sed -e 's/-I//g')" --global-option="-L$(gdal-config --libs | sed -e 's/-L//g')"
    #     pip install -r requirements.txt
    - name: Run Jupyter notebook
      run: 
        source activate classification
        jupyter execute crop_image.pynb
      shell: bash
    # - name: Lint with flake8
    #   run: |
    #     # stop the build if there are Python syntax errors or undefined names
    #     flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
    #     # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
    #     flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
    # - name: Test with pytest
    #   run: |
    #     pytest
    # - name: run-notebook
    #   uses: yaananth/run-notebook@v2